RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 MKRN3Q13064 507 aaKnown RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 PICALMQ13492 652 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 MIGA2Q7L4E1 593 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 CERS3Q8IU89 383 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 ZFPM1Q8IX07 1006 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 ZNF384Q8TF68 577 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 GPATCH3Q96I76 525 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 CLMNQ96JQ2 1002 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 ELP3Q9H9T3 547 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 PIH1D3Q9NQM4 214 aaKnown RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 RNF186Q9NXI6 227 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 SAGE1Q9NXZ1 904 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 THSD7BQ9C0I4 1608 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 SMARCA5O60264 1052 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 WDHD1O75717 1129 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 TRPA1O75762 1119 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 ATP5JP18859 108 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 RHBDL3P58872 404 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 COL13A1Q5TAT6 717 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 TEX11Q8IYF3 940 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 MAGEB6Q8N7X4 407 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 WNK4Q96J92 1243 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 WRNIP1Q96S55 665 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 DNAJC2Q99543 621 aaKnown RBP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 ANTXR1Q9H6X2 564 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 AATFQ9NY61 560 aaKnown RBP eCLIP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 SUPT16HQ9Y5B9 1047 aaKnown RBP8.48□□□□□ -1.05
TOP3A-207ENST00000493648 NDUFB9Q9Y6M9 179 aa8.48□□□□□ -1.05
TOP3A-207ENST00000493648 MYO5AQ9Y4I1 1855 aaKnown RBP8.47□□□□□ -1.05
TOP3A-207ENST00000493648 GOLIM4O00461 696 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 ALDH1A1P00352 501 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 VGLL4Q14135 290 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 SLC9C2Q5TAH2 1124 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 OTUD7BQ6GQQ9 843 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 ERO1BQ86YB8 467 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 SH3RF3Q8TEJ3 882 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-207ENST00000493648 ZKSCAN4Q969J2 545 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-207ENST00000493648 OPTNQ96CV9 577 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 OSBPL5Q9H0X9 879 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-207ENST00000493648 DHX36Q9H2U1 1008 aaKnown RBP8.47□□□□□ -1.05
TOP3A-207ENST00000493648 RWDD1Q9H446 243 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-207ENST00000493648 DDX4Q9NQI0 724 aaKnown RBP8.47□□□□□ -1.05
TOP3A-207ENST00000493648 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 TSKSQ9UJT2 592 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 ZNF112Q9UJU3 913 aa8.47□□□□□ -1.05
TOP3A-207ENST00000493648 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 DDTLA6NHG4 134 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-207ENST00000493648 TBC1D12O60347 775 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 GTF2A2P52657 109 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 HDAC1Q13547 482 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-207ENST00000493648 ZSCAN25Q6NSZ9 544 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 ADGRA1Q86SQ6 560 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 IFNL1Q8IU54 200 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 MIGA1Q8NAN2 632 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 TGFBRAP1Q8WUH2 860 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 GCC1Q96CN9 775 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 OTUD5Q96G74 571 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 HAUS7Q99871 368 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.46□□□□□ -1.06
TOP3A-207ENST00000493648 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.46□□□□□ -1.06
TOP3A-207ENST00000493648 PAG1Q9NWQ8 432 aa8.46□□□□□ -1.06
TOP3A-207ENST00000493648 TESPA1A2RU30 521 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-207ENST00000493648 SPDYE5A6NIY4 337 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 CTNND1O60716 968 aaKnown RBP8.45□□□□□ -1.06
TOP3A-207ENST00000493648 TBC1D8O95759 1140 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 INPP5BP32019 993 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 GJA5P36382 358 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 USP5P45974 858 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 DYNLL1P63167 89 aaKnown RBP8.45□□□□□ -1.06
TOP3A-207ENST00000493648 PPATQ06203 517 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 ANKRD45Q5TZF3 282 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 FOXP4Q8IVH2 680 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-207ENST00000493648 MAPKAPK5Q8IW41 473 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 TRIM34Q9BYJ4 488 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 PI4KBQ9UBF8 816 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 RFX7Q2KHR2 1363 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 ATRNL1Q5VV63 1379 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
TOP3A-207ENST00000493648 CCL15-CCL14A0A0B4J2E2 113 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 ERC2O15083 957 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 HLA-DOAP06340 250 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 CETPP11597 493 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 PDE6AP16499 860 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 ADD2P35612 726 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 PPIL2Q13356 520 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 SNAPC2Q13487 334 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 CCL15Q16663 113 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 NOL9Q5SY16 702 aaKnown RBP8.44□□□□□ -1.06
TOP3A-207ENST00000493648 SCYL3Q8IZE3 742 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 EXOC6Q8TAG9 804 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms