RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 SLC26A6Q9BXS9 759 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 PEAK1Q9H792 1746 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 RFX7Q2KHR2 1363 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 BECN2A8MW95 431 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 PLS1Q14651 629 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 Q6ZUG5 572 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 RUFY3Q7L099 469 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 CREBRFQ8IUR6 639 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 CELF1Q92879 486 aaKnown RBP7.26□□□□□ -1.25
NF1-215ENST00000493220 TANGO6Q9C0B7 1094 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 VAT1LQ9HCJ6 419 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 ZNF277Q9NRM2 450 aaPredicted RBP7.26□□□□□ -1.25
NF1-215ENST00000493220 BCL9LQ86UU0 1499 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 KINO60870 393 aaKnown RBP7.26□□□□□ -1.25
NF1-215ENST00000493220 MBD3O95983 291 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 OSBPP22059 807 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 CD209Q9NNX6 404 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 DISP2A7MBM2 1401 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 TRPM3Q9HCF6 1732 aaPredicted RBP7.26□□□□□ -1.25
NF1-215ENST00000493220 IRX3P78415 501 aaPredicted RBP7.26□□□□□ -1.25
NF1-215ENST00000493220 STIM1Q13586 685 aa7.26□□□□□ -1.25
NF1-215ENST00000493220 BBXQ8WY36 941 aaPredicted RBP7.26□□□□□ -1.25
NF1-215ENST00000493220 DBNLQ9UJU6 430 aaKnown RBP7.26□□□□□ -1.25
NF1-215ENST00000493220 GNA11P29992 359 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 CFAP100Q494V2 611 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 C2orf69Q8N8R5 385 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 DDX11Q96FC9 970 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 ZMYND15Q9H091 742 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 OSBPL3Q9H4L5 887 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 HACL1Q9UJ83 578 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 LMNB1P20700 586 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 NAPAP54920 295 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 CERKLQ49MI3 558 aaPredicted RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 HEATR3Q7Z4Q2 680 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 CEP57L1Q8IYX8 460 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 TBC1D16Q8TBP0 767 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 SLC27A2O14975 620 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 SGSM2O43147 1006 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 ADD2P35612 726 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 CCT2P78371 535 aaKnown RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 STRIP1Q5VSL9 837 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 IFNL3Q8IZI9 196 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 UPF3BQ9BZI7 483 aaKnown RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 LRRC27Q9C0I9 530 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 ORC3Q9UBD5 711 aaPredicted RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 MRC1P22897 1456 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 POLRMTO00411 1230 aaKnown RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 CRKP46108 304 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 MCTP2Q6DN12 878 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 ERMNQ8TAM6 284 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 CHURC1Q8WUH1 139 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 BRF1Q92994 677 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 IVNS1ABPQ9Y6Y0 642 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 SPDYE3A6NKU9 549 aa7.25□□□□□ -1.25
NF1-215ENST00000493220 PES1O00541 588 aaKnown RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 ONECUT3O60422 494 aaPredicted RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
NF1-215ENST00000493220 MED23Q9ULK4 1368 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 EPS15P42566 896 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 ME1P48163 572 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 AKNAD1Q5T1N1 836 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 HOMER1Q86YM7 354 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 CCDC144CPQ8IYA2 1237 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 SPATA32Q96LK8 384 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 DNAI2Q9GZS0 605 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 RPS6KB1P23443 525 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 ARID4AP29374 1257 aaPredicted RBP7.24□□□□□ -1.25
NF1-215ENST00000493220 TNNT3P45378 269 aaPredicted RBP7.24□□□□□ -1.25
NF1-215ENST00000493220 ZMYM1Q5SVZ6 1142 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 CCDC129Q6ZRS4 1044 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 ABCB5Q2M3G0 1257 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 TBC1D32Q96NH3 1257 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 CSRNP1Q96S65 589 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 SDF4Q9BRK5 362 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 PI4KBQ9UBF8 816 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 STK24Q9Y6E0 443 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 MECOMQ03112 1051 aa7.24□□□□□ -1.25
NF1-215ENST00000493220 FOXP4Q8IVH2 680 aaPredicted RBP7.24□□□□□ -1.25
NF1-215ENST00000493220 ZNF512BQ96KM6 892 aaPredicted RBP7.24□□□□□ -1.25
NF1-215ENST00000493220 ZSCAN16Q9H4T2 348 aaPredicted RBP7.24□□□□□ -1.25
NF1-215ENST00000493220 SASH1O94885 1247 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 EPHA10Q5JZY3 1008 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 PNMA8AQ86V59 439 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 FAM227BQ96M60 508 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 ZNF341Q9BYN7 854 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 GJB2P29033 226 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 KRT2P35908 639 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 CTDSPL2Q05D32 466 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 RASGRF1Q13972 1273 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 GIMAP6Q6P9H5 292 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 OTUD7AQ8TE49 926 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 MAGEC2Q9UBF1 373 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 GOLGA6L3A6NEY3 463 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 B4E1Z4 1266 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 SLC1A4P43007 532 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 PRKG1Q13976 671 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 USP26Q9BXU7 913 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 RIPOR2Q9Y4F9 1068 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 MROH7-TTC4A0A0A0MT08 1334 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 UBN2Q6ZU65 1347 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms