RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 NOP58Q9Y2X3 529 aaKnown RBP25.27■■□□□ 1.64
CLTA-208ENST00000493185 PICALMQ13492 652 aa25.26■■□□□ 1.63
CLTA-208ENST00000493185 NOL9Q5SY16 702 aaKnown RBP25.26■■□□□ 1.63
CLTA-208ENST00000493185 OTOP1Q7RTM1 612 aa25.26■■□□□ 1.63
CLTA-208ENST00000493185 CD99L2Q8TCZ2 262 aa25.26■■□□□ 1.63
CLTA-208ENST00000493185 PANK1Q8TE04 598 aa25.26■■□□□ 1.63
CLTA-208ENST00000493185 NSUN4Q96CB9 384 aaKnown RBP25.26■■□□□ 1.63
CLTA-208ENST00000493185 ZCCHC17Q9NP64 241 aaKnown RBP25.26■■□□□ 1.63
CLTA-208ENST00000493185 LRP2BPQ9P2M1 347 aa25.26■■□□□ 1.63
CLTA-208ENST00000493185 ZNF384Q8TF68 577 aa25.25■■□□□ 1.63
CLTA-208ENST00000493185 DBNDD2Q9BQY9 259 aa25.25■■□□□ 1.63
CLTA-208ENST00000493185 ATRNL1Q5VV63 1379 aa25.24■■□□□ 1.63
CLTA-208ENST00000493185 BTBD19C9JJ37 291 aa25.24■■□□□ 1.63
CLTA-208ENST00000493185 MAP4K4O95819 1239 aaPredicted RBP25.24■■□□□ 1.63
CLTA-208ENST00000493185 CEP85Q6P2H3 762 aa25.24■■□□□ 1.63
CLTA-208ENST00000493185 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.24■■□□□ 1.63
CLTA-208ENST00000493185 DDX4Q9NQI0 724 aaKnown RBP25.24■■□□□ 1.63
CLTA-208ENST00000493185 RHBDL3P58872 404 aa25.23■■□□□ 1.63
CLTA-208ENST00000493185 EFCC1Q9HA90 598 aa25.23■■□□□ 1.63
CLTA-208ENST00000493185 NPM3O75607 178 aaKnown RBP25.22■■□□□ 1.63
CLTA-208ENST00000493185 ARHGEF6Q15052 776 aa25.22■■□□□ 1.63
CLTA-208ENST00000493185 SH3BP5LQ7L8J4 393 aa25.22■■□□□ 1.63
CLTA-208ENST00000493185 NOL10Q9BSC4 688 aaKnown RBP25.22■■□□□ 1.63
CLTA-208ENST00000493185 PICK1Q9NRD5 415 aa25.22■■□□□ 1.63
CLTA-208ENST00000493185 SNRKQ9NRH2 765 aa25.22■■□□□ 1.63
CLTA-208ENST00000493185 MAST2Q6P0Q8 1798 aa25.22■■□□□ 1.63
CLTA-208ENST00000493185 DDTLA6NHG4 134 aaPredicted RBP25.21■■□□□ 1.63
CLTA-208ENST00000493185 KCNH4Q9UQ05 1017 aa25.21■■□□□ 1.63
CLTA-208ENST00000493185 PHF20L1A8MW92 1017 aa25.2■■□□□ 1.62
CLTA-208ENST00000493185 NAA16Q6N069 864 aaPredicted RBP25.2■■□□□ 1.62
CLTA-208ENST00000493185 ERC1Q8IUD2 1116 aa25.2■■□□□ 1.62
CLTA-208ENST00000493185 SCYL3Q8IZE3 742 aa25.2■■□□□ 1.62
CLTA-208ENST00000493185 ZNF512BQ96KM6 892 aaPredicted RBP25.2■■□□□ 1.62
CLTA-208ENST00000493185 TLR2O60603 784 aa25.19■■□□□ 1.62
CLTA-208ENST00000493185 MAP3K10Q02779 954 aa25.19■■□□□ 1.62
CLTA-208ENST00000493185 DBNLQ9UJU6 430 aaKnown RBP25.19■■□□□ 1.62
CLTA-208ENST00000493185 PTPN22Q9Y2R2 807 aa25.19■■□□□ 1.62
CLTA-208ENST00000493185 DOCK1Q14185 1865 aa25.18■■□□□ 1.62
CLTA-208ENST00000493185 ANKRD23Q86SG2 305 aa25.18■■□□□ 1.62
CLTA-208ENST00000493185 TEX11Q8IYF3 940 aa25.18■■□□□ 1.62
CLTA-208ENST00000493185 CCDC8Q9H0W5 538 aaPredicted RBP25.18■■□□□ 1.62
CLTA-208ENST00000493185 COL2A1P02458 1487 aaPredicted RBP25.17■■□□□ 1.62
CLTA-208ENST00000493185 CXCL11O14625 94 aa25.17■■□□□ 1.62
CLTA-208ENST00000493185 CTNND1O60716 968 aaKnown RBP25.17■■□□□ 1.62
CLTA-208ENST00000493185 IGSF3O75054 1194 aa25.17■■□□□ 1.62
CLTA-208ENST00000493185 BAG3O95817 575 aa25.17■■□□□ 1.62
CLTA-208ENST00000493185 CYP2E1P05181 493 aaPredicted RBP25.17■■□□□ 1.62
CLTA-208ENST00000493185 PLCG2P16885 1265 aa25.17■■□□□ 1.62
CLTA-208ENST00000493185 HSP90AB4PQ58FF6 505 aa25.17■■□□□ 1.62
CLTA-208ENST00000493185 EAF2Q96CJ1 260 aaPredicted RBP25.17■■□□□ 1.62
CLTA-208ENST00000493185 EXOC6BQ9Y2D4 811 aa25.17■■□□□ 1.62
CLTA-208ENST00000493185 TBC1D12O60347 775 aa25.16■■□□□ 1.62
CLTA-208ENST00000493185 ZAP70P43403 619 aa25.16■■□□□ 1.62
CLTA-208ENST00000493185 KIF22Q14807 665 aa25.16■■□□□ 1.62
CLTA-208ENST00000493185 OSBPL5Q9H0X9 879 aaPredicted RBP25.16■■□□□ 1.62
CLTA-208ENST00000493185 TLR7Q9NYK1 1049 aaKnown RBP25.16■■□□□ 1.62
CLTA-208ENST00000493185 RCAN3Q9UKA8 241 aa25.16■■□□□ 1.62
CLTA-208ENST00000493185 DDX19BQ9UMR2 479 aa25.16■■□□□ 1.62
CLTA-208ENST00000493185 MYO5AQ9Y4I1 1855 aaKnown RBP25.16■■□□□ 1.62
CLTA-208ENST00000493185 ZHX2Q9Y6X8 837 aa25.16■■□□□ 1.62
CLTA-208ENST00000493185 PDHXO00330 501 aa25.15■■□□□ 1.62
CLTA-208ENST00000493185 PTPRAP18433 802 aa25.15■■□□□ 1.62
CLTA-208ENST00000493185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.15■■□□□ 1.62
CLTA-208ENST00000493185 AATFQ9NY61 560 aaKnown RBP eCLIP25.15■■□□□ 1.62
CLTA-208ENST00000493185 HTTP42858 3142 aa25.14■■□□□ 1.62
CLTA-208ENST00000493185 CAP1Q01518 475 aa25.14■■□□□ 1.62
CLTA-208ENST00000493185 SH3RF3Q8TEJ3 882 aaPredicted RBP25.14■■□□□ 1.62
CLTA-208ENST00000493185 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.62
CLTA-208ENST00000493185 COG6Q9Y2V7 657 aa25.14■■□□□ 1.62
CLTA-208ENST00000493185 HMMRO75330 724 aa25.13■■□□□ 1.61
CLTA-208ENST00000493185 SLURP2P0DP57 97 aa25.13■■□□□ 1.61
CLTA-208ENST00000493185 FASTKD5Q7L8L6 764 aaKnown RBP25.13■■□□□ 1.61
CLTA-208ENST00000493185 AACSQ86V21 672 aa25.13■■□□□ 1.61
CLTA-208ENST00000493185 PIH1D3Q9NQM4 214 aaKnown RBP25.13■■□□□ 1.61
CLTA-208ENST00000493185 PPP4CP60510 307 aa25.12■■□□□ 1.61
CLTA-208ENST00000493185 LACTBP83111 547 aaPredicted RBP25.12■■□□□ 1.61
CLTA-208ENST00000493185 MOGSQ13724 837 aa25.12■■□□□ 1.61
CLTA-208ENST00000493185 RPAP2Q8IXW5 612 aaPredicted RBP25.12■■□□□ 1.61
CLTA-208ENST00000493185 PARK7Q99497 189 aaKnown RBP25.12■■□□□ 1.61
CLTA-208ENST00000493185 AFG3L2Q9Y4W6 797 aa25.12■■□□□ 1.61
CLTA-208ENST00000493185 PTPRFP10586 1907 aa25.12■■□□□ 1.61
CLTA-208ENST00000493185 A0A0G2JLL6 359 aaPredicted RBP25.11■■□□□ 1.61
CLTA-208ENST00000493185 C17orf99Q6UX52 265 aa25.11■■□□□ 1.61
CLTA-208ENST00000493185 PRRT2Q7Z6L0 340 aaPredicted RBP25.11■■□□□ 1.61
CLTA-208ENST00000493185 ZBTB40Q9NUA8 1239 aa25.11■■□□□ 1.61
CLTA-208ENST00000493185 CPA4Q9UI42 421 aa25.11■■□□□ 1.61
CLTA-208ENST00000493185 PHIPQ8WWQ0 1821 aa25.11■■□□□ 1.61
CLTA-208ENST00000493185 CDK5RAP2Q96SN8 1893 aa25.11■■□□□ 1.61
CLTA-208ENST00000493185 FOCADQ5VW36 1801 aa25.1■■□□□ 1.61
CLTA-208ENST00000493185 FAM196BA6NMK8 535 aa25.1■■□□□ 1.61
CLTA-208ENST00000493185 IDH1O75874 414 aaKnown RBP25.1■■□□□ 1.61
CLTA-208ENST00000493185 RHPN1Q8TCX5 695 aa25.1■■□□□ 1.61
CLTA-208ENST00000493185 ARMC5Q96C12 935 aa25.1■■□□□ 1.61
CLTA-208ENST00000493185 DHX36Q9H2U1 1008 aaKnown RBP25.1■■□□□ 1.61
CLTA-208ENST00000493185 PI4KBQ9UBF8 816 aa25.1■■□□□ 1.61
CLTA-208ENST00000493185 HERC5Q9UII4 1024 aaKnown RBP25.1■■□□□ 1.61
CLTA-208ENST00000493185 PDE4DIPQ5VU43 2346 aa25.1■■□□□ 1.61
CLTA-208ENST00000493185 ATAD5Q96QE3 1844 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 TNRC18O15417 2968 aaPredicted RBP25.09■■□□□ 1.61
CLTA-208ENST00000493185 GNRH1P01148 92 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms