RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TMOD4Q9NZQ9 345 aa4.92□□□□□ -1.62
BRCA1-220ENST00000492859 C6orf203Q9P0P8 240 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-220ENST00000492859 ZMAT5Q9UDW3 170 aaKnown RBP4.92□□□□□ -1.62
BRCA1-220ENST00000492859 PCSK1NQ9UHG2 260 aa4.92□□□□□ -1.62
BRCA1-220ENST00000492859 PNMA8BQ9ULN7 279 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-220ENST00000492859 NOB1Q9ULX3 412 aaKnown RBP4.92□□□□□ -1.62
BRCA1-220ENST00000492859 GPRASP1Q5JY77 1395 aa4.92□□□□□ -1.62
BRCA1-220ENST00000492859 ANKRD18BA2A2Z9 1011 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 STXBP3O00186 592 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 PER1O15534 1290 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 SGTAO43765 313 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 KIAA0754O94854 1291 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 RASGRP1O95267 797 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 ITGBL1O95965 494 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 MMEP08473 750 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TYRP1P17643 537 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 CAPN2P17655 700 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 CNGA1P29973 690 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 HOXA10P31260 410 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 HPDP32754 393 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 PLA2G4AP47712 749 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 SLC7A5Q01650 507 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 MTMR3Q13615 1198 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 MYBPC3Q14896 1274 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 MLC1Q15049 377 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 RSAD2Q8WXG1 361 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 EIF2AK1Q9BQI3 630 aaKnown RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 CNNM2Q9H8M5 875 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TMEM260Q9NX78 707 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 STAP2Q9UGK3 403 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 GTF2IRD1Q9UHL9 959 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 ERBB4Q15303 1308 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 A0A0G2JS52 829 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 USP17L3A6NCW0 530 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 USP17L4A6NCW7 530 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TRIM64A6NGJ6 449 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TRIM64BA6NI03 449 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 ALG1L2C9J202 215 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 ELL2O00472 640 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TREHO43280 583 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 PPFIA2O75334 1257 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TRIM27P14373 513 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 PMLP29590 882 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 KRT83P78385 493 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 PURAQ00577 322 aaKnown RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 SEPT7Q16181 437 aaKnown RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 MUM1Q2TAK8 710 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TUSC1Q2TAM9 212 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 RILPL1Q5EBL4 403 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TJAP1Q5JTD0 557 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 GALNT17Q6IS24 598 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 USP17L2Q6R6M4 530 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 C16orf86Q6ZW13 317 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 RSRC2Q7L4I2 434 aaKnown RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 EEPD1Q7L9B9 569 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 CATSPER4Q7RTX7 472 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 USP17L1Q7RTZ2 530 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 ERC1Q8IUD2 1116 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TRIML1Q8N9V2 468 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 NKX2-3Q8TAU0 364 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 TIFAQ96CG3 184 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 THAP11Q96EK4 314 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 CEP95Q96GE4 821 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 STRBPQ96SI9 672 aaKnown RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 DNAJC7Q99615 494 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 KIF2CQ99661 725 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 RTFDC1Q9BY42 306 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 ASPSCR1Q9BZE9 553 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 CDH19Q9H159 772 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 SMC4Q9NTJ3 1288 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 DGKBQ9Y6T7 804 aa4.91□□□□□ -1.62
BRCA1-220ENST00000492859 DDX49Q9Y6V7 483 aaKnown RBP4.91□□□□□ -1.62
BRCA1-220ENST00000492859 A0A0B4J203 849 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 CCDC196A0A1B0GTZ2 297 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 RCCD1A6NED2 376 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 CCDC85CA6NKD9 419 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 C9IYK1 514 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 K7ENM7 598 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 KLF4O43474 513 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 TMCC2O75069 709 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 VCAM1P19320 739 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 PRPHP41219 470 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 MRE11P49959 708 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 RCAN1P53805 252 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 PAK2Q13177 524 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 GRM1Q13255 1194 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 FIP1L1Q6UN15 594 aaKnown RBP4.9□□□□□ -1.63
BRCA1-220ENST00000492859 ANKS3Q6ZW76 656 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 GALNT5Q7Z7M9 940 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 TCEAL8Q8IYN2 117 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 LILRB1Q8NHL6 650 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-220ENST00000492859 GSDMBQ8TAX9 411 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 TRPM4Q8TD43 1214 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 AFAP1L1Q8TED9 768 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 ATP6V1E2Q96A05 226 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 NACC2Q96BF6 587 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 SETDB2Q96T68 719 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 MTRQ99707 1265 aa4.9□□□□□ -1.63
BRCA1-220ENST00000492859 GTPBP4Q9BZE4 634 aaKnown RBP4.9□□□□□ -1.63
BRCA1-220ENST00000492859 SLC7A5P2Q9GIP4 190 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms