RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 ADAMTS7Q9UKP4 1686 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 PXDNLA1KZ92 1463 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 DCDC2BA2VCK2 349 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 FAM187AA6NFU0 413 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 LIG3P49916 1009 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 CABP4P57796 275 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 CWF19L2Q2TBE0 894 aaKnown RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 BHMTQ93088 406 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 POLR3GLQ9BT43 218 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 CWC22Q9HCG8 908 aaKnown RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 TNRC6CQ9HCJ0 1690 aaKnown RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 MYOM2P54296 1465 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 PLEKHD1A6NEE1 506 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 MMP20O60882 483 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 FAM157BP0CG42 384 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 TARSP26639 723 aaKnown RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 ZNF165P49910 485 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 PRPF40BQ6NWY9 871 aaKnown RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 GOLM1Q8NBJ4 401 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 MARK1Q9P0L2 795 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 NRKQ7Z2Y5 1582 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 F6X3S4 739 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 EIF4EBP3O60516 100 aaPredicted RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 SMNDC1O75940 238 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNX13-209ENST00000492626 EIF6P56537 245 aaKnown RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 LAMC2Q13753 1193 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 TTBK2Q6IQ55 1244 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 ADCY9O60503 1353 aa4.22□□□□□ -1.73
SNX13-209ENST00000492626 BRD4O60885 1362 aaPredicted RBP4.22□□□□□ -1.73
SNX13-209ENST00000492626 IMPDH2P12268 514 aa4.21□□□□□ -1.73
SNX13-209ENST00000492626 NT5C1AQ9BXI3 368 aa4.21□□□□□ -1.73
SNX13-209ENST00000492626 ZCCHC2Q9C0B9 1178 aaKnown RBP4.21□□□□□ -1.73
SNX13-209ENST00000492626 NUCKS1Q9H1E3 243 aaKnown RBP4.21□□□□□ -1.73
SNX13-209ENST00000492626 TOR4AQ9NXH8 423 aa4.21□□□□□ -1.73
SNX13-209ENST00000492626 PLCH1Q4KWH8 1693 aa4.21□□□□□ -1.73
SNX13-209ENST00000492626 TROQ12816 1431 aaPredicted RBP4.21□□□□□ -1.73
SNX13-209ENST00000492626 SLIT2O94813 1529 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 THSD7BQ9C0I4 1608 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 HSD3B2P26439 372 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 SPEM2Q0P670 501 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 MKL1Q969V6 931 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 LRRC59Q96AG4 307 aaKnown RBP4.21□□□□□ -1.74
SNX13-209ENST00000492626 NSUN5Q96P11 429 aaKnown RBP4.21□□□□□ -1.74
SNX13-209ENST00000492626 CHRDQ9H2X0 955 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 TLR7Q9NYK1 1049 aaKnown RBP4.21□□□□□ -1.74
SNX13-209ENST00000492626 ROBO2Q9HCK4 1378 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 PF4P02776 101 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 LMNB2Q03252 620 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 EMILIN2Q9BXX0 1053 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 GINM1Q9NU53 330 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 TMEM39AQ9NV64 488 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 CEP152O94986 1710 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 MYOM1P52179 1685 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 GDF9O60383 454 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 CAMK2GQ13555 558 aaPredicted RBP4.21□□□□□ -1.74
SNX13-209ENST00000492626 SEZ6Q53EL9 994 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 JARID2Q92833 1246 aaPredicted RBP4.21□□□□□ -1.74
SNX13-209ENST00000492626 ZNF408Q9H9D4 720 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 PLA2G2EQ9NZK7 142 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 PRKAG3Q9UGI9 489 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 ADAMTS1Q9UHI8 967 aa4.21□□□□□ -1.74
SNX13-209ENST00000492626 A0A0G2JS52 829 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 TLR3O15455 904 aaKnown RBP4.2□□□□□ -1.74
SNX13-209ENST00000492626 CYP2E1P05181 493 aaPredicted RBP4.2□□□□□ -1.74
SNX13-209ENST00000492626 SOX18P35713 384 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 PPP2R5EQ16537 467 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 RPS26P11Q5JNZ5 115 aaPredicted RBP4.2□□□□□ -1.74
SNX13-209ENST00000492626 CCNJLQ8IV13 435 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 SPON1Q9HCB6 807 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 BCL9O00512 1426 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 CAMTA1Q9Y6Y1 1673 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 EIF2AK2P19525 551 aaKnown RBP4.2□□□□□ -1.74
SNX13-209ENST00000492626 PRR20EP86478 221 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 PRR20CP86479 221 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 PRR20DP86480 221 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 PRR20BP86481 221 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 PRR20AP86496 221 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 LATS2Q9NRM7 1088 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 COL14A1Q05707 1796 aaKnown RBP4.2□□□□□ -1.74
SNX13-209ENST00000492626 A0A096LPE4 126 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 A0A1W2PPZ6 126 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 PDE2AO00408 941 aaPredicted RBP4.2□□□□□ -1.74
SNX13-209ENST00000492626 SFSWAPQ12872 951 aaKnown RBP4.2□□□□□ -1.74
SNX13-209ENST00000492626 NBPF8Q3BBV2 869 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 FAM117BQ6P1L5 589 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 OR6P1Q8NGX9 317 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 DEPDC7Q96QD5 511 aa4.2□□□□□ -1.74
SNX13-209ENST00000492626 TRIM37O94972 964 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 PTPRAP18433 802 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 NRLP54845 237 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 KCNQ4P56696 695 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 PTPROQ16827 1216 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 ZNF746Q6NUN9 644 aaPredicted RBP4.19□□□□□ -1.74
SNX13-209ENST00000492626 PHC3Q8NDX5 983 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 CCDC136Q96JN2 1154 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 UBE2OQ9C0C9 1292 aaKnown RBP4.19□□□□□ -1.74
SNX13-209ENST00000492626 PIF1Q9H611 641 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 ACTR10Q9NZ32 417 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 UBP1Q9NZI7 540 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms