RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CTNND1O60716 968 aaKnown RBP11.29□□□□□ -0.6
HDAC3-212ENST00000492407 LDHCP07864 332 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 RGS3P49796 1198 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 TIMM10P62072 90 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 GSTO1P78417 241 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 RASGRF1Q13972 1273 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 SLC4A8Q2Y0W8 1093 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 MEIS3Q99687 375 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 TBC1D2Q9BYX2 928 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 SRRDQ9UH36 339 aa11.29□□□□□ -0.6
HDAC3-212ENST00000492407 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
HDAC3-212ENST00000492407 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-212ENST00000492407 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 BCRP11274 1271 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 PTPRAP18433 802 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 PSMC4P43686 418 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 GPAT2Q6NUI2 795 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-212ENST00000492407 XAGE2Q96GT9 111 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 ARHGAP39Q9C0H5 1083 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 MROH7-TTC4A0A0A0MT08 1334 aa11.28□□□□□ -0.6
HDAC3-212ENST00000492407 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-212ENST00000492407 GNAI2P04899 355 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 ADORA1P30542 326 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 FCGRTP55899 365 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 TFCP2Q12800 502 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 GPR108Q9NPR9 543 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 ABCF2Q9UG63 623 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 CPA4Q9UI42 421 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.61
HDAC3-212ENST00000492407 COL2A1P02458 1487 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-212ENST00000492407 OSBPP22059 807 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 ARID4AP29374 1257 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-212ENST00000492407 GRK4P32298 578 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 BTDP43251 543 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 RHBDL3P58872 404 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 MECOMQ03112 1051 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 G3BP1Q13283 466 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDAC3-212ENST00000492407 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
HDAC3-212ENST00000492407 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 ZSCAN29Q8IWY8 852 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-212ENST00000492407 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 RAET1EQ8TD07 263 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 OSBPL5Q9H0X9 879 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-212ENST00000492407 HMG20BQ9P0W2 317 aa11.26□□□□□ -0.61
HDAC3-212ENST00000492407 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-212ENST00000492407 GJB1P08034 283 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 TRIM27P14373 513 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 UBXN2AP68543 259 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 GORABQ5T7V8 394 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 NSUN4Q96CB9 384 aaKnown RBP11.25□□□□□ -0.61
HDAC3-212ENST00000492407 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
HDAC3-212ENST00000492407 DDX4Q9NQI0 724 aaKnown RBP11.25□□□□□ -0.61
HDAC3-212ENST00000492407 CTGFP29279 349 aa11.24□□□□□ -0.61
HDAC3-212ENST00000492407 GJA8P48165 433 aa11.24□□□□□ -0.61
HDAC3-212ENST00000492407 PABPC4Q13310 644 aaKnown RBP eCLIP11.24□□□□□ -0.61
HDAC3-212ENST00000492407 IRF5Q13568 498 aa11.24□□□□□ -0.61
HDAC3-212ENST00000492407 TMED8Q6PL24 325 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-212ENST00000492407 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-212ENST00000492407 ZNF512BQ96KM6 892 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-212ENST00000492407 DHX36Q9H2U1 1008 aaKnown RBP11.24□□□□□ -0.61
HDAC3-212ENST00000492407 GINM1Q9NU53 330 aa11.24□□□□□ -0.61
HDAC3-212ENST00000492407 HERC5Q9UII4 1024 aaKnown RBP11.24□□□□□ -0.61
HDAC3-212ENST00000492407 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
HDAC3-212ENST00000492407 AGTPBP1Q9UPW5 1226 aa11.24□□□□□ -0.61
HDAC3-212ENST00000492407 MYPNQ86TC9 1320 aa11.24□□□□□ -0.61
HDAC3-212ENST00000492407 BAG3O95817 575 aa11.23□□□□□ -0.61
HDAC3-212ENST00000492407 CYP2C8P10632 490 aa11.23□□□□□ -0.61
HDAC3-212ENST00000492407 PLCG2P16885 1265 aa11.23□□□□□ -0.61
HDAC3-212ENST00000492407 POLA2Q14181 598 aa11.23□□□□□ -0.61
HDAC3-212ENST00000492407 ZNF384Q8TF68 577 aa11.23□□□□□ -0.61
HDAC3-212ENST00000492407 NOL10Q9BSC4 688 aaKnown RBP11.23□□□□□ -0.61
HDAC3-212ENST00000492407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDAC3-212ENST00000492407 CENPFP49454 3210 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 GCLCP48506 637 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-212ENST00000492407 PPP4CP60510 307 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 PRKCZQ05513 592 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 PICALMQ13492 652 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 CCDC158Q5M9N0 1113 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 ZKSCAN2Q63HK3 967 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 GADL1Q6ZQY3 521 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 UBE2Q1Q7Z7E8 422 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 CERS3Q8IU89 383 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 FOXP4Q8IVH2 680 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-212ENST00000492407 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-212ENST00000492407 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-212ENST00000492407 ANP32EQ9BTT0 268 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms