RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 C8orf58Q8NAV2 365 aa11.73□□□□□ -0.53
NCKAP1-206ENST00000492058 RAET1EQ8TD07 263 aa11.73□□□□□ -0.53
NCKAP1-206ENST00000492058 SHISA4Q96DD7 197 aa11.73□□□□□ -0.53
NCKAP1-206ENST00000492058 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
NCKAP1-206ENST00000492058 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 TLR2O60603 784 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 RNF40O75150 1001 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 FMNL1O95466 1100 aaPredicted RBP11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 CETPP11597 493 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 CCL5P13501 91 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 PSMC4P43686 418 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 TNFAIP1Q13829 316 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 WDR43Q15061 677 aaKnown RBP eCLIP11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 TATDN2Q93075 761 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 RNF208Q9H0X6 261 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 CPA4Q9UI42 421 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 PNMA3Q9UL41 463 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
NCKAP1-206ENST00000492058 BTBD19C9JJ37 291 aa11.71□□□□□ -0.53
NCKAP1-206ENST00000492058 H7C1W4 665 aa11.71□□□□□ -0.53
NCKAP1-206ENST00000492058 NKX2-3Q8TAU0 364 aa11.71□□□□□ -0.53
NCKAP1-206ENST00000492058 STAP2Q9UGK3 403 aa11.71□□□□□ -0.53
NCKAP1-206ENST00000492058 TTF2Q9UNY4 1162 aaKnown RBP11.71□□□□□ -0.53
NCKAP1-206ENST00000492058 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 GNRH1P01148 92 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 HOXD10P28358 340 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 GRK4P32298 578 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 PRMT2P55345 433 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 ZKSCAN4Q969J2 545 aaPredicted RBP11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 TRIM47Q96LD4 638 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 SRRDQ9UH36 339 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 RIPOR2Q9Y4F9 1068 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 SPEF2Q9C093 1822 aa11.7□□□□□ -0.54
NCKAP1-206ENST00000492058 FARP2O94887 1054 aaPredicted RBP11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 GJB1P08034 283 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 IL1R1P14778 569 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 CTGFP29279 349 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 GGCXP38435 758 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 GJA8P48165 433 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 TNNI2P48788 182 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 CACNB3P54284 484 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 GNAI1P63096 354 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 SNAPC2Q13487 334 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 MFSD14BQ5SR56 506 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 DZIP1LQ8IYY4 767 aaKnown RBP11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
NCKAP1-206ENST00000492058 GRXCR2A6NFK2 248 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 SPDYE5A6NIY4 337 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 IRF6O14896 467 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 TFRCP02786 760 aaKnown RBP11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 OSBPP22059 807 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 UBXN2AP68543 259 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 GCKRQ14397 625 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 ERO1BQ86YB8 467 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 U2AF1L4Q8WU68 220 aaKnown RBP11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 WRNIP1Q96S55 665 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 STK31Q9BXU1 1019 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 PRO3102Q9H379 93 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 IFT57Q9NWB7 429 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 COL6A3P12111 3177 aa11.68□□□□□ -0.54
NCKAP1-206ENST00000492058 MYPNQ86TC9 1320 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 CSF1RP07333 972 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 CRKP46108 304 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 FKBP1AP62942 108 aaKnown RBP11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 IFIT5Q13325 482 aaKnown RBP11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 RALBP1Q15311 655 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 C17orf99Q6UX52 265 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 G2E3Q7L622 706 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 DEFB123Q8N688 67 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 CHMP4AQ9BY43 222 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 UNC93B1Q9H1C4 597 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 SERPINA10Q9UK55 444 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 SNCAIPQ9Y6H5 919 aa11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
NCKAP1-206ENST00000492058 IRS2Q9Y4H2 1338 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 PDHXO00330 501 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 GYG1P46976 350 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 SLC4A3P48751 1232 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 C15orf52Q6ZUT6 534 aaKnown RBP11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 Q7L0L9 218 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 UBE2Q1Q7Z7E8 422 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
NCKAP1-206ENST00000492058 ZSWIM8A7E2V4 1837 aa11.65□□□□□ -0.54
NCKAP1-206ENST00000492058 APAF1O14727 1248 aa11.65□□□□□ -0.54
NCKAP1-206ENST00000492058 SGPL1O95470 568 aa11.65□□□□□ -0.54
NCKAP1-206ENST00000492058 PRKCZQ05513 592 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms