RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SH3BP5LQ7L8J4 393 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 ERC1Q8IUD2 1116 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 ZNF512BQ96KM6 892 aaPredicted RBP18.39■□□□□ 0.53
TOM1-215ENST00000491987 ZNF112Q9UJU3 913 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 MAST2Q6P0Q8 1798 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 ATRNL1Q5VV63 1379 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 AK9Q5TCS8 1911 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 ZAP70P43403 619 aa18.38■□□□□ 0.53
TOM1-215ENST00000491987 ZBTB40Q9NUA8 1239 aa18.38■□□□□ 0.53
TOM1-215ENST00000491987 DDTLA6NHG4 134 aaPredicted RBP18.37■□□□□ 0.53
TOM1-215ENST00000491987 IRF6O14896 467 aa18.37■□□□□ 0.53
TOM1-215ENST00000491987 CYP2E1P05181 493 aaPredicted RBP18.37■□□□□ 0.53
TOM1-215ENST00000491987 PPIL2Q13356 520 aa18.37■□□□□ 0.53
TOM1-215ENST00000491987 C20orf194Q5TEA3 1177 aa18.37■□□□□ 0.53
TOM1-215ENST00000491987 RPAP2Q8IXW5 612 aaPredicted RBP18.37■□□□□ 0.53
TOM1-215ENST00000491987 SLURP2P0DP57 97 aa18.36■□□□□ 0.53
TOM1-215ENST00000491987 PPATQ06203 517 aa18.36■□□□□ 0.53
TOM1-215ENST00000491987 SNAPC2Q13487 334 aa18.36■□□□□ 0.53
TOM1-215ENST00000491987 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
TOM1-215ENST00000491987 NAA16Q6N069 864 aaPredicted RBP18.36■□□□□ 0.53
TOM1-215ENST00000491987 AACSQ86V21 672 aa18.36■□□□□ 0.53
TOM1-215ENST00000491987 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
TOM1-215ENST00000491987 IL1RAPL2Q9NP60 686 aa18.36■□□□□ 0.53
TOM1-215ENST00000491987 PIH1D3Q9NQM4 214 aaKnown RBP18.36■□□□□ 0.53
TOM1-215ENST00000491987 APBB1O00213 710 aa18.35■□□□□ 0.53
TOM1-215ENST00000491987 HMMRO75330 724 aa18.35■□□□□ 0.53
TOM1-215ENST00000491987 CETPP11597 493 aa18.35■□□□□ 0.53
TOM1-215ENST00000491987 TAF1CQ15572 869 aaPredicted RBP18.35■□□□□ 0.53
TOM1-215ENST00000491987 NOL9Q5SY16 702 aaKnown RBP18.35■□□□□ 0.53
TOM1-215ENST00000491987 SIRT2Q8IXJ6 389 aa18.35■□□□□ 0.53
TOM1-215ENST00000491987 TEX11Q8IYF3 940 aa18.35■□□□□ 0.53
TOM1-215ENST00000491987 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.35■□□□□ 0.53
TOM1-215ENST00000491987 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
TOM1-215ENST00000491987 MAP4K4O95819 1239 aaPredicted RBP18.34■□□□□ 0.53
TOM1-215ENST00000491987 PKN2Q16513 984 aaKnown RBP18.34■□□□□ 0.53
TOM1-215ENST00000491987 SH3RF3Q8TEJ3 882 aaPredicted RBP18.34■□□□□ 0.53
TOM1-215ENST00000491987 NOL10Q9BSC4 688 aaKnown RBP18.34■□□□□ 0.53
TOM1-215ENST00000491987 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
TOM1-215ENST00000491987 AATFQ9NY61 560 aaKnown RBP eCLIP18.34■□□□□ 0.53
TOM1-215ENST00000491987 HPS5Q9UPZ3 1129 aa18.34■□□□□ 0.53
TOM1-215ENST00000491987 PHF20L1A8MW92 1017 aa18.33■□□□□ 0.52
TOM1-215ENST00000491987 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
TOM1-215ENST00000491987 PDE3AQ14432 1141 aa18.33■□□□□ 0.52
TOM1-215ENST00000491987 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
TOM1-215ENST00000491987 KIF1BPQ96EK5 621 aa18.33■□□□□ 0.52
TOM1-215ENST00000491987 ZFYVE28Q9HCC9 887 aa18.33■□□□□ 0.52
TOM1-215ENST00000491987 NDUFB9Q9Y6M9 179 aa18.33■□□□□ 0.52
TOM1-215ENST00000491987 BTBD19C9JJ37 291 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 BAG3O95817 575 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 MAP3K10Q02779 954 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 CD99L2Q8TCZ2 262 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 ERO1AQ96HE7 468 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 OSBPL5Q9H0X9 879 aaPredicted RBP18.32■□□□□ 0.52
TOM1-215ENST00000491987 BCL11AQ9H165 835 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 PICK1Q9NRD5 415 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 TRIM17Q9Y577 477 aa18.32■□□□□ 0.52
TOM1-215ENST00000491987 COL2A1P02458 1487 aaPredicted RBP18.32■□□□□ 0.52
TOM1-215ENST00000491987 MYO5AQ9Y4I1 1855 aaKnown RBP18.31■□□□□ 0.52
TOM1-215ENST00000491987 FAM196BA6NMK8 535 aa18.31■□□□□ 0.52
TOM1-215ENST00000491987 IDH1O75874 414 aaKnown RBP18.31■□□□□ 0.52
TOM1-215ENST00000491987 SP3Q02447 781 aa18.31■□□□□ 0.52
TOM1-215ENST00000491987 FBXO46Q6PJ61 603 aaPredicted RBP18.31■□□□□ 0.52
TOM1-215ENST00000491987 CLASRPQ8N2M8 674 aaKnown RBP18.31■□□□□ 0.52
TOM1-215ENST00000491987 KCNH4Q9UQ05 1017 aa18.31■□□□□ 0.52
TOM1-215ENST00000491987 CYP7A1P22680 504 aa18.3■□□□□ 0.52
TOM1-215ENST00000491987 OTOP1Q7RTM1 612 aa18.3■□□□□ 0.52
TOM1-215ENST00000491987 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
TOM1-215ENST00000491987 DOCK1Q14185 1865 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 IGSF3O75054 1194 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 PLCG2P16885 1265 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 PTPRAP18433 802 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 SOX10P56693 466 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 PPP4CP60510 307 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
TOM1-215ENST00000491987 MAPKAPK5Q8IW41 473 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 TGFBRAP1Q8WUH2 860 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.29■□□□□ 0.52
TOM1-215ENST00000491987 ZCCHC17Q9NP64 241 aaKnown RBP18.29■□□□□ 0.52
TOM1-215ENST00000491987 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
TOM1-215ENST00000491987 ZHX2Q9Y6X8 837 aa18.29■□□□□ 0.52
TOM1-215ENST00000491987 TBC1D12O60347 775 aa18.28■□□□□ 0.52
TOM1-215ENST00000491987 CTNND1O60716 968 aaKnown RBP18.28■□□□□ 0.52
TOM1-215ENST00000491987 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
TOM1-215ENST00000491987 CAP1Q01518 475 aa18.28■□□□□ 0.52
TOM1-215ENST00000491987 MOGSQ13724 837 aa18.28■□□□□ 0.52
TOM1-215ENST00000491987 ANKRD23Q86SG2 305 aa18.28■□□□□ 0.52
TOM1-215ENST00000491987 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
TOM1-215ENST00000491987 FLT1P17948 1338 aa18.27■□□□□ 0.52
TOM1-215ENST00000491987 PDHXO00330 501 aa18.27■□□□□ 0.52
TOM1-215ENST00000491987 CXCL11O14625 94 aa18.27■□□□□ 0.52
TOM1-215ENST00000491987 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.52
TOM1-215ENST00000491987 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
TOM1-215ENST00000491987 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
TOM1-215ENST00000491987 TLR2O60603 784 aa18.26■□□□□ 0.51
TOM1-215ENST00000491987 RGS19P49795 217 aa18.26■□□□□ 0.51
TOM1-215ENST00000491987 MAP3K12Q12852 859 aa18.26■□□□□ 0.51
TOM1-215ENST00000491987 CDK5RAP2Q96SN8 1893 aa18.26■□□□□ 0.51
TOM1-215ENST00000491987 SIPA1L1O43166 1804 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms