RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-219ENST00000491747 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
BRCA1-219ENST00000491747 MAP3K11Q16584 847 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 LDLRAD1Q5T700 205 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 HAUS7Q99871 368 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 CHGBP05060 677 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 DYNLL1P63167 89 aaKnown RBP11.31□□□□□ -0.6
BRCA1-219ENST00000491747 SLFNL1Q499Z3 407 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 SH3RF3Q8TEJ3 882 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-219ENST00000491747 GCC1Q96CN9 775 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 ECHDC1Q9NTX5 307 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.6
BRCA1-219ENST00000491747 SALL3Q9BXA9 1300 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 SLURP2P0DP57 97 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 CYP7A1P22680 504 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 ECE1P42892 770 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 PICALMQ13492 652 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 ARMC9Q7Z3E5 817 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 RASAL3Q86YV0 1011 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 CLMNQ96JQ2 1002 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 PAG1Q9NWQ8 432 aa11.31□□□□□ -0.6
BRCA1-219ENST00000491747 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-219ENST00000491747 SIPA1L1O43166 1804 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 SLC10A3P09131 477 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 LAMB1P07942 1786 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 DDTLA6NHG4 134 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-219ENST00000491747 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 PPP1R12BO60237 982 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-219ENST00000491747 PPP4CP60510 307 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 TTF1Q15361 905 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-219ENST00000491747 MIGA2Q7L4E1 593 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 MIGA1Q8NAN2 632 aa11.3□□□□□ -0.6
BRCA1-219ENST00000491747 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 ENTPD3O75355 529 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 PDE6AP16499 860 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 PI4K2BQ8TCG2 481 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 MYH1P12882 1939 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 ATRNL1Q5VV63 1379 aa11.29□□□□□ -0.6
BRCA1-219ENST00000491747 TRAK2O60296 914 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 IGSF3O75054 1194 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 MAP4K4O95819 1239 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 HSPA1AP0DMV8 641 aaKnown RBP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 HSPA1BP0DMV9 641 aaKnown RBP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 XRCC6P12956 609 aaKnown RBP eCLIP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 SLC9C2Q5TAH2 1124 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 TEX11Q8IYF3 940 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 MAP2K2P36507 400 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 KIF23Q02241 960 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.28□□□□□ -0.6
BRCA1-219ENST00000491747 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 ZNF532Q9HCE3 1301 aa11.28□□□□□ -0.6
BRCA1-219ENST00000491747 BAG3O95817 575 aa11.27□□□□□ -0.6
BRCA1-219ENST00000491747 GJA5P36382 358 aa11.27□□□□□ -0.6
BRCA1-219ENST00000491747 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.6
BRCA1-219ENST00000491747 MRE11P49959 708 aa11.27□□□□□ -0.6
BRCA1-219ENST00000491747 NOGQ13253 232 aa11.27□□□□□ -0.6
BRCA1-219ENST00000491747 TGFBRAP1Q8WUH2 860 aa11.27□□□□□ -0.6
BRCA1-219ENST00000491747 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.6
BRCA1-219ENST00000491747 NOL10Q9BSC4 688 aaKnown RBP11.27□□□□□ -0.6
BRCA1-219ENST00000491747 LNPKQ9C0E8 428 aa11.27□□□□□ -0.6
BRCA1-219ENST00000491747 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.6
BRCA1-219ENST00000491747 RRAGDQ9NQL2 400 aaPredicted RBP11.27□□□□□ -0.6
BRCA1-219ENST00000491747 TTC41PQ6P2S7 1318 aa11.27□□□□□ -0.6
BRCA1-219ENST00000491747 DDX60LQ5H9U9 1706 aaKnown RBP11.27□□□□□ -0.61
BRCA1-219ENST00000491747 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
BRCA1-219ENST00000491747 MX1P20591 662 aa11.27□□□□□ -0.61
BRCA1-219ENST00000491747 ADD2P35612 726 aa11.27□□□□□ -0.61
BRCA1-219ENST00000491747 ANKRD13AQ8IZ07 590 aa11.27□□□□□ -0.61
BRCA1-219ENST00000491747 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
BRCA1-219ENST00000491747 ZKSCAN4Q969J2 545 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-219ENST00000491747 CSRNP1Q96S65 589 aa11.27□□□□□ -0.61
BRCA1-219ENST00000491747 RBM25P49756 843 aaKnown RBP11.26□□□□□ -0.61
BRCA1-219ENST00000491747 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 NUCB1Q02818 461 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 VGLL4Q14135 290 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 MAPKAPK5Q8IW41 473 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 ZSCAN29Q8IWY8 852 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-219ENST00000491747 SLC10A4Q96EP9 437 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 GZF1Q9H116 711 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-219ENST00000491747 ELP3Q9H9T3 547 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 NAV1Q8NEY1 1877 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 ATAD5Q96QE3 1844 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 COL2A1P02458 1487 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-219ENST00000491747 FOXN1O15353 648 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 INPP5BP32019 993 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 MAP3K10Q02779 954 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms