RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 PAXIP1Q6ZW49 1069 aaPredicted RBP23.61■■□□□ 1.37
SEC22A-209ENST00000491366 SAPCD2Q86UD0 394 aa23.61■■□□□ 1.37
SEC22A-209ENST00000491366 SKAP1Q86WV1 359 aa23.61■■□□□ 1.37
SEC22A-209ENST00000491366 LCORLQ8N3X6 602 aa23.61■■□□□ 1.37
SEC22A-209ENST00000491366 MKRN1Q9UHC7 482 aaKnown RBP23.61■■□□□ 1.37
SEC22A-209ENST00000491366 RPAP1Q9BWH6 1393 aaPredicted RBP23.61■■□□□ 1.37
SEC22A-209ENST00000491366 ZFYP08048 801 aaPredicted RBP23.6■■□□□ 1.37
SEC22A-209ENST00000491366 USP5P45974 858 aa23.6■■□□□ 1.37
SEC22A-209ENST00000491366 PUS7LQ9H0K6 701 aaKnown RBP23.6■■□□□ 1.37
SEC22A-209ENST00000491366 ANGEL1Q9UNK9 670 aaKnown RBP23.6■■□□□ 1.37
SEC22A-209ENST00000491366 PAPPA2Q9BXP8 1791 aa23.6■■□□□ 1.37
SEC22A-209ENST00000491366 FLT1P17948 1338 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 UBE2Q2LH0YL09 131 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 PPP1R12BO60237 982 aaPredicted RBP23.59■■□□□ 1.37
SEC22A-209ENST00000491366 FKBP1BP68106 108 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 SH3BP5LQ7L8J4 393 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 ARMC9Q7Z3E5 817 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 APPBP2Q92624 585 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 AIDAQ96BJ3 306 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 CSRNP1Q96S65 589 aa23.59■■□□□ 1.37
SEC22A-209ENST00000491366 CRNKL1Q9BZJ0 848 aaKnown RBP23.59■■□□□ 1.37
SEC22A-209ENST00000491366 OSBPL5Q9H0X9 879 aaPredicted RBP23.59■■□□□ 1.37
SEC22A-209ENST00000491366 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.59■■□□□ 1.37
SEC22A-209ENST00000491366 DDTLA6NHG4 134 aaPredicted RBP23.58■■□□□ 1.37
SEC22A-209ENST00000491366 NPM3O75607 178 aaKnown RBP23.58■■□□□ 1.37
SEC22A-209ENST00000491366 GRM1Q13255 1194 aa23.58■■□□□ 1.37
SEC22A-209ENST00000491366 TTC22Q5TAA0 569 aa23.58■■□□□ 1.37
SEC22A-209ENST00000491366 MIGA2Q7L4E1 593 aa23.58■■□□□ 1.37
SEC22A-209ENST00000491366 HOOK2Q96ED9 719 aa23.58■■□□□ 1.37
SEC22A-209ENST00000491366 SAP30BPQ9UHR5 308 aaKnown RBP23.58■■□□□ 1.37
SEC22A-209ENST00000491366 DEFB115Q30KQ5 88 aa23.57■■□□□ 1.36
SEC22A-209ENST00000491366 OSBP2Q969R2 916 aa23.57■■□□□ 1.36
SEC22A-209ENST00000491366 RASSF10A6NK89 507 aa23.56■■□□□ 1.36
SEC22A-209ENST00000491366 M0R2C6 588 aa23.56■■□□□ 1.36
SEC22A-209ENST00000491366 USP2O75604 605 aaPredicted RBP23.56■■□□□ 1.36
SEC22A-209ENST00000491366 SLC4A8Q2Y0W8 1093 aa23.56■■□□□ 1.36
SEC22A-209ENST00000491366 SDR42E1Q8WUS8 393 aa23.56■■□□□ 1.36
SEC22A-209ENST00000491366 PRKAB2O43741 272 aa23.55■■□□□ 1.36
SEC22A-209ENST00000491366 GSPT1P15170 499 aaKnown RBP23.55■■□□□ 1.36
SEC22A-209ENST00000491366 IREB2P48200 963 aaKnown RBP23.55■■□□□ 1.36
SEC22A-209ENST00000491366 DCAF15Q66K64 600 aa23.55■■□□□ 1.36
SEC22A-209ENST00000491366 SEC62Q99442 399 aaKnown RBP23.55■■□□□ 1.36
SEC22A-209ENST00000491366 CDK5RAP2Q96SN8 1893 aa23.55■■□□□ 1.36
SEC22A-209ENST00000491366 AK9Q5TCS8 1911 aa23.55■■□□□ 1.36
SEC22A-209ENST00000491366 ATRNL1Q5VV63 1379 aa23.54■■□□□ 1.36
SEC22A-209ENST00000491366 ZMYM1Q5SVZ6 1142 aa23.54■■□□□ 1.36
SEC22A-209ENST00000491366 CYP4F22Q6NT55 531 aa23.54■■□□□ 1.36
SEC22A-209ENST00000491366 PALD1Q9ULE6 856 aa23.54■■□□□ 1.36
SEC22A-209ENST00000491366 SLC4A4Q9Y6R1 1079 aa23.54■■□□□ 1.36
SEC22A-209ENST00000491366 SLURP2P0DP57 97 aa23.53■■□□□ 1.36
SEC22A-209ENST00000491366 RGMBQ6NW40 437 aa23.53■■□□□ 1.36
SEC22A-209ENST00000491366 ZNF341Q9BYN7 854 aa23.53■■□□□ 1.36
SEC22A-209ENST00000491366 FOCADQ5VW36 1801 aa23.53■■□□□ 1.36
SEC22A-209ENST00000491366 COL2A1P02458 1487 aaPredicted RBP23.53■■□□□ 1.36
SEC22A-209ENST00000491366 GPAA1O43292 621 aa23.52■■□□□ 1.36
SEC22A-209ENST00000491366 ZNF157P51786 506 aaPredicted RBP23.52■■□□□ 1.36
SEC22A-209ENST00000491366 MAP3K11Q16584 847 aa23.52■■□□□ 1.36
SEC22A-209ENST00000491366 CAPNS2Q96L46 248 aa23.52■■□□□ 1.36
SEC22A-209ENST00000491366 STRBPQ96SI9 672 aaKnown RBP23.52■■□□□ 1.36
SEC22A-209ENST00000491366 DHX36Q9H2U1 1008 aaKnown RBP23.52■■□□□ 1.36
SEC22A-209ENST00000491366 FAM196BA6NMK8 535 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 SDSP20132 328 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 VEGFBP49765 207 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 NMIQ13287 307 aaPredicted RBP23.51■■□□□ 1.35
SEC22A-209ENST00000491366 LDLRAD1Q5T700 205 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 KLRG1Q96E93 195 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 HHIPL1Q96JK4 782 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 CLMNQ96JQ2 1002 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 FAM227BQ96M60 508 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 WRNIP1Q96S55 665 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 DCP1AQ9NPI6 582 aaPredicted RBP23.51■■□□□ 1.35
SEC22A-209ENST00000491366 MCM9Q9NXL9 1143 aa23.51■■□□□ 1.35
SEC22A-209ENST00000491366 HLA-DOAP06340 250 aa23.5■■□□□ 1.35
SEC22A-209ENST00000491366 CCDC129Q6ZRS4 1044 aa23.5■■□□□ 1.35
SEC22A-209ENST00000491366 PI4KBQ9UBF8 816 aa23.5■■□□□ 1.35
SEC22A-209ENST00000491366 NAV1Q8NEY1 1877 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 POLR3DP05423 398 aaPredicted RBP23.49■■□□□ 1.35
SEC22A-209ENST00000491366 ECE1P42892 770 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 MAP3K9P80192 1104 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 ANKRD13AQ8IZ07 590 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.49■■□□□ 1.35
SEC22A-209ENST00000491366 DDRGK1Q96HY6 314 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 TRIM34Q9BYJ4 488 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.49■■□□□ 1.35
SEC22A-209ENST00000491366 HELLSQ9NRZ9 838 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 DIAPH3Q9NSV4 1193 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 ATP8A2Q9NTI2 1148 aa23.49■■□□□ 1.35
SEC22A-209ENST00000491366 WDR33Q9C0J8 1336 aaKnown RBP23.49■■□□□ 1.35
SEC22A-209ENST00000491366 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.48■■□□□ 1.35
SEC22A-209ENST00000491366 RASAL3Q86YV0 1011 aa23.48■■□□□ 1.35
SEC22A-209ENST00000491366 CRACR2BQ8N4Y2 399 aaPredicted RBP23.48■■□□□ 1.35
SEC22A-209ENST00000491366 ZKSCAN4Q969J2 545 aaPredicted RBP23.48■■□□□ 1.35
SEC22A-209ENST00000491366 SLC10A4Q96EP9 437 aa23.48■■□□□ 1.35
SEC22A-209ENST00000491366 ELP3Q9H9T3 547 aa23.48■■□□□ 1.35
SEC22A-209ENST00000491366 CSADQ9Y600 493 aa23.48■■□□□ 1.35
SEC22A-209ENST00000491366 OTOFQ9HC10 1997 aa23.47■■□□□ 1.35
SEC22A-209ENST00000491366 APPP05067 770 aa23.47■■□□□ 1.35
SEC22A-209ENST00000491366 CYP2D6P10635 497 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms