RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RLBP1P12271 317 aa20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 CERS3Q8IU89 383 aa20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 PANK1Q8TE04 598 aa20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 NSUN4Q96CB9 384 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 TRIM34Q9BYJ4 488 aa20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 ZNF112Q9UJU3 913 aa20.25■□□□□ 0.83
PDLIM2-217ENST00000491330 IRF6O14896 467 aa20.24■□□□□ 0.83
PDLIM2-217ENST00000491330 INPP5BP32019 993 aa20.24■□□□□ 0.83
PDLIM2-217ENST00000491330 NOL9Q5SY16 702 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-217ENST00000491330 CEP85Q6P2H3 762 aa20.24■□□□□ 0.83
PDLIM2-217ENST00000491330 TMED8Q6PL24 325 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-217ENST00000491330 TBC1D9Q6ZT07 1266 aa20.24■□□□□ 0.83
PDLIM2-217ENST00000491330 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
PDLIM2-217ENST00000491330 MYH13Q9UKX3 1938 aa20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 CXCL11O14625 94 aa20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 MCAMP43121 646 aa20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 RGS19P49795 217 aa20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 FASTKD5Q7L8L6 764 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 TEX11Q8IYF3 940 aa20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 PTPN18Q99952 460 aa20.23■□□□□ 0.83
PDLIM2-217ENST00000491330 CTNND1O60716 968 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-217ENST00000491330 SCYL3Q8IZE3 742 aa20.22■□□□□ 0.83
PDLIM2-217ENST00000491330 DHX36Q9H2U1 1008 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-217ENST00000491330 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDLIM2-217ENST00000491330 SNRKQ9NRH2 765 aa20.22■□□□□ 0.83
PDLIM2-217ENST00000491330 ANKRD23Q86SG2 305 aa20.21■□□□□ 0.83
PDLIM2-217ENST00000491330 AACSQ86V21 672 aa20.21■□□□□ 0.83
PDLIM2-217ENST00000491330 CCDC8Q9H0W5 538 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-217ENST00000491330 R3HDMLQ9H3Y0 253 aa20.21■□□□□ 0.83
PDLIM2-217ENST00000491330 TBC1D12O60347 775 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 TLR2O60603 784 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 GNRH1P01148 92 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 TTF1Q15361 905 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 OTOP1Q7RTM1 612 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 NBPF11Q86T75 865 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 CD99L2Q8TCZ2 262 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 KIF1BPQ96EK5 621 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 TBC1D2Q9BYX2 928 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 EXOC6BQ9Y2D4 811 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 ZHX2Q9Y6X8 837 aa20.2■□□□□ 0.82
PDLIM2-217ENST00000491330 BTBD19C9JJ37 291 aa20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 RAB11FIP3O75154 756 aa20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 IFIT2P09913 472 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 HOXD10P28358 340 aa20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 PDE3AQ14432 1141 aa20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 ZFPM1Q8IX07 1006 aa20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 PARK7Q99497 189 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 KCNH4Q9UQ05 1017 aa20.19■□□□□ 0.82
PDLIM2-217ENST00000491330 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 HLA-DOAP06340 250 aa20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 PRMT2P55345 433 aa20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 SOX10P56693 466 aa20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 RHBDL3P58872 404 aa20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 OSBPL5Q9H0X9 879 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 PI4KBQ9UBF8 816 aa20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-217ENST00000491330 DDTLA6NHG4 134 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 PDHXO00330 501 aa20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 CYP2E1P05181 493 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 ZAP70P43403 619 aa20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 MAP3K10Q02779 954 aa20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 CRACR2BQ8N4Y2 399 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 RHPN1Q8TCX5 695 aa20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 EAF2Q96CJ1 260 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 AS3MTQ9HBK9 375 aa20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 AATFQ9NY61 560 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 DBNLQ9UJU6 430 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 PTPN22Q9Y2R2 807 aa20.17■□□□□ 0.82
PDLIM2-217ENST00000491330 PTPRAP18433 802 aa20.16■□□□□ 0.82
PDLIM2-217ENST00000491330 CYP7A1P22680 504 aa20.16■□□□□ 0.82
PDLIM2-217ENST00000491330 PPP4CP60510 307 aa20.16■□□□□ 0.82
PDLIM2-217ENST00000491330 FOXP4Q8IVH2 680 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-217ENST00000491330 DDX4Q9NQI0 724 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-217ENST00000491330 PHF20L1A8MW92 1017 aa20.15■□□□□ 0.82
PDLIM2-217ENST00000491330 APBB1O00213 710 aa20.15■□□□□ 0.82
PDLIM2-217ENST00000491330 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM2-217ENST00000491330 GADL1Q6ZQY3 521 aa20.15■□□□□ 0.82
PDLIM2-217ENST00000491330 ZBTB40Q9NUA8 1239 aa20.15■□□□□ 0.82
PDLIM2-217ENST00000491330 ATRNL1Q5VV63 1379 aa20.15■□□□□ 0.82
PDLIM2-217ENST00000491330 USP5P45974 858 aa20.14■□□□□ 0.81
PDLIM2-217ENST00000491330 SH3BP5LQ7L8J4 393 aa20.14■□□□□ 0.81
PDLIM2-217ENST00000491330 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-217ENST00000491330 TMEM106CQ9BVX2 250 aa20.14■□□□□ 0.81
PDLIM2-217ENST00000491330 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
PDLIM2-217ENST00000491330 PNMA3Q9UL41 463 aa20.14■□□□□ 0.81
PDLIM2-217ENST00000491330 SMCR8Q8TEV9 937 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-217ENST00000491330 TGFBRAP1Q8WUH2 860 aa20.13■□□□□ 0.81
PDLIM2-217ENST00000491330 IL1RAPL2Q9NP60 686 aa20.13■□□□□ 0.81
PDLIM2-217ENST00000491330 GINM1Q9NU53 330 aa20.13■□□□□ 0.81
PDLIM2-217ENST00000491330 SLC45A1Q9Y2W3 748 aa20.13■□□□□ 0.81
PDLIM2-217ENST00000491330 COL2A1P02458 1487 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms