RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RAI14Q9P0K7 980 aa22.12■■□□□ 1.13
HMGN1-219ENST00000491183 DBNLQ9UJU6 430 aaKnown RBP22.12■■□□□ 1.13
HMGN1-219ENST00000491183 DOCK2Q92608 1830 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 PHF20L1A8MW92 1017 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 CETPP11597 493 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 MS4A1P11836 297 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 GSTO1P78417 241 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 MAP3K10Q02779 954 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 PICALMQ13492 652 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 FBXO46Q6PJ61 603 aaPredicted RBP22.11■■□□□ 1.13
HMGN1-219ENST00000491183 ZNF512BQ96KM6 892 aaPredicted RBP22.11■■□□□ 1.13
HMGN1-219ENST00000491183 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
HMGN1-219ENST00000491183 LRP2BPQ9P2M1 347 aa22.11■■□□□ 1.13
HMGN1-219ENST00000491183 CYP2E1P05181 493 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-219ENST00000491183 CAP1Q01518 475 aa22.1■■□□□ 1.13
HMGN1-219ENST00000491183 SNAPC2Q13487 334 aa22.1■■□□□ 1.13
HMGN1-219ENST00000491183 TAF1CQ15572 869 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-219ENST00000491183 NOL9Q5SY16 702 aaKnown RBP22.1■■□□□ 1.13
HMGN1-219ENST00000491183 ZSCAN29Q8IWY8 852 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-219ENST00000491183 RCAN3Q9UKA8 241 aa22.1■■□□□ 1.13
HMGN1-219ENST00000491183 EXOC6BQ9Y2D4 811 aa22.1■■□□□ 1.13
HMGN1-219ENST00000491183 COG6Q9Y2V7 657 aa22.1■■□□□ 1.13
HMGN1-219ENST00000491183 MYO5AQ9Y4I1 1855 aaKnown RBP22.1■■□□□ 1.13
HMGN1-219ENST00000491183 BTBD19C9JJ37 291 aa22.09■■□□□ 1.13
HMGN1-219ENST00000491183 NPM3O75607 178 aaKnown RBP22.09■■□□□ 1.13
HMGN1-219ENST00000491183 SP3Q02447 781 aa22.09■■□□□ 1.13
HMGN1-219ENST00000491183 OTOP1Q7RTM1 612 aa22.09■■□□□ 1.13
HMGN1-219ENST00000491183 CD99L2Q8TCZ2 262 aa22.09■■□□□ 1.13
HMGN1-219ENST00000491183 ZFYVE28Q9HCC9 887 aa22.09■■□□□ 1.13
HMGN1-219ENST00000491183 TRIM17Q9Y577 477 aa22.09■■□□□ 1.13
HMGN1-219ENST00000491183 ZAP70P43403 619 aa22.08■■□□□ 1.13
HMGN1-219ENST00000491183 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.08■■□□□ 1.13
HMGN1-219ENST00000491183 ERO1AQ96HE7 468 aa22.08■■□□□ 1.13
HMGN1-219ENST00000491183 ZBTB40Q9NUA8 1239 aa22.08■■□□□ 1.13
HMGN1-219ENST00000491183 KCNH4Q9UQ05 1017 aa22.08■■□□□ 1.13
HMGN1-219ENST00000491183 MAP4K4O95819 1239 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-219ENST00000491183 SOX10P56693 466 aa22.07■■□□□ 1.12
HMGN1-219ENST00000491183 MLLT1Q03111 559 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-219ENST00000491183 MOGSQ13724 837 aa22.06■■□□□ 1.12
HMGN1-219ENST00000491183 SIRT2Q8IXJ6 389 aa22.06■■□□□ 1.12
HMGN1-219ENST00000491183 ZCCHC17Q9NP64 241 aaKnown RBP22.06■■□□□ 1.12
HMGN1-219ENST00000491183 PIH1D3Q9NQM4 214 aaKnown RBP22.06■■□□□ 1.12
HMGN1-219ENST00000491183 DDX19BQ9UMR2 479 aa22.06■■□□□ 1.12
HMGN1-219ENST00000491183 NAA16Q6N069 864 aaPredicted RBP22.05■■□□□ 1.12
HMGN1-219ENST00000491183 ADGRA1Q86SQ6 560 aa22.05■■□□□ 1.12
HMGN1-219ENST00000491183 RPAP2Q8IXW5 612 aaPredicted RBP22.05■■□□□ 1.12
HMGN1-219ENST00000491183 SCYL3Q8IZE3 742 aa22.05■■□□□ 1.12
HMGN1-219ENST00000491183 SH3RF3Q8TEJ3 882 aaPredicted RBP22.05■■□□□ 1.12
HMGN1-219ENST00000491183 TBC1D12O60347 775 aa22.04■■□□□ 1.12
HMGN1-219ENST00000491183 ERC1Q8IUD2 1116 aa22.04■■□□□ 1.12
HMGN1-219ENST00000491183 TEX11Q8IYF3 940 aa22.04■■□□□ 1.12
HMGN1-219ENST00000491183 OSBPL5Q9H0X9 879 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-219ENST00000491183 AATFQ9NY61 560 aaKnown RBP eCLIP22.04■■□□□ 1.12
HMGN1-219ENST00000491183 MAST2Q6P0Q8 1798 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 CXCL11O14625 94 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 TLR2O60603 784 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 PTPRAP18433 802 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 PPP4CP60510 307 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 ANKRD23Q86SG2 305 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 AACSQ86V21 672 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 RHPN1Q8TCX5 695 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 EFCC1Q9HA90 598 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 IL1RAPL2Q9NP60 686 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 PTPN22Q9Y2R2 807 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 ZHX2Q9Y6X8 837 aa22.03■■□□□ 1.12
HMGN1-219ENST00000491183 FAM196BA6NMK8 535 aa22.02■■□□□ 1.12
HMGN1-219ENST00000491183 CTNND1O60716 968 aaKnown RBP22.02■■□□□ 1.12
HMGN1-219ENST00000491183 HSP90AB4PQ58FF6 505 aa22.02■■□□□ 1.12
HMGN1-219ENST00000491183 C20orf194Q5TEA3 1177 aa22.02■■□□□ 1.12
HMGN1-219ENST00000491183 PICK1Q9NRD5 415 aa22.02■■□□□ 1.12
HMGN1-219ENST00000491183 NDUFB9Q9Y6M9 179 aa22.02■■□□□ 1.12
HMGN1-219ENST00000491183 COL2A1P02458 1487 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-219ENST00000491183 PDHXO00330 501 aa22.01■■□□□ 1.11
HMGN1-219ENST00000491183 IGSF3O75054 1194 aa22.01■■□□□ 1.11
HMGN1-219ENST00000491183 BAG3O95817 575 aa22.01■■□□□ 1.11
HMGN1-219ENST00000491183 GPAT2Q6NUI2 795 aa22.01■■□□□ 1.11
HMGN1-219ENST00000491183 NOL10Q9BSC4 688 aaKnown RBP22.01■■□□□ 1.11
HMGN1-219ENST00000491183 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.01■■□□□ 1.11
HMGN1-219ENST00000491183 AFG3L2Q9Y4W6 797 aa22.01■■□□□ 1.11
HMGN1-219ENST00000491183 PHIPQ8WWQ0 1821 aa22.01■■□□□ 1.11
HMGN1-219ENST00000491183 DOCK1Q14185 1865 aa22■■□□□ 1.11
HMGN1-219ENST00000491183 CDK5RAP2Q96SN8 1893 aa22■■□□□ 1.11
HMGN1-219ENST00000491183 ANTXR1Q9H6X2 564 aa22■■□□□ 1.11
HMGN1-219ENST00000491183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22■■□□□ 1.11
HMGN1-219ENST00000491183 CYP7A1P22680 504 aa21.99■■□□□ 1.11
HMGN1-219ENST00000491183 DYNLL1P63167 89 aaKnown RBP21.99■■□□□ 1.11
HMGN1-219ENST00000491183 RRP1BQ14684 758 aaKnown RBP21.99■■□□□ 1.11
HMGN1-219ENST00000491183 C17orf99Q6UX52 265 aa21.99■■□□□ 1.11
HMGN1-219ENST00000491183 CCDC84Q86UT8 332 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-219ENST00000491183 TGFBRAP1Q8WUH2 860 aa21.99■■□□□ 1.11
HMGN1-219ENST00000491183 ZSWIM8A7E2V4 1837 aa21.99■■□□□ 1.11
HMGN1-219ENST00000491183 A0A0G2JLL6 359 aaPredicted RBP21.98■■□□□ 1.11
HMGN1-219ENST00000491183 APBB1O00213 710 aa21.98■■□□□ 1.11
HMGN1-219ENST00000491183 HMMRO75330 724 aa21.98■■□□□ 1.11
HMGN1-219ENST00000491183 IDH1O75874 414 aaKnown RBP21.98■■□□□ 1.11
HMGN1-219ENST00000491183 PLCG2P16885 1265 aa21.98■■□□□ 1.11
HMGN1-219ENST00000491183 PDE3AQ14432 1141 aa21.98■■□□□ 1.11
HMGN1-219ENST00000491183 PRRT2Q7Z6L0 340 aaPredicted RBP21.98■■□□□ 1.11
HMGN1-219ENST00000491183 KIF1BPQ96EK5 621 aa21.98■■□□□ 1.11
HMGN1-219ENST00000491183 ARHGAP39Q9C0H5 1083 aa21.98■■□□□ 1.11
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