RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 TMEM39BQ9GZU3 492 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 EPB41L4AQ9HCS5 686 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 PGAP2Q9UHJ9 254 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 RAD50Q92878 1312 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 PITPNM2Q9BZ72 1349 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 SGSM2O43147 1006 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 SLURP2P0DP57 97 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 RASA3Q14644 834 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 KRT26Q7Z3Y9 468 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 TICAM2Q86XR7 235 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 ZC3H15Q8WU90 426 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 OSBPL5Q9H0X9 879 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-227ENST00000491104 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 TRAF5O00463 557 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 APPP05067 770 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 CYP2D6P10635 497 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 SH3BP5LQ7L8J4 393 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 CERS3Q8IU89 383 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 DEFB129Q9H1M3 183 aa12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 DCP1AQ9NPI6 582 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-227ENST00000491104 CYP2D7A0A087X1C5 515 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 ENTPD3O75355 529 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 HSPD1P10809 573 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 TNNI2P48788 182 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 PTH1RQ03431 593 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 TNFAIP1Q13829 316 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 ZSCAN29Q8IWY8 852 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 FAM151AQ8WW52 585 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 CDCA5Q96FF9 252 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 MCM9Q9NXL9 1143 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 PALD1Q9ULE6 856 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 SSC5DA1L4H1 1573 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
CACNA1C-227ENST00000491104 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 GNAT2P19087 354 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 TDO2P48775 406 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 C8orf34Q49A92 452 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 CDC37L1Q7L3B6 337 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 FAM83AQ86UY5 434 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 TEPSINQ96N21 525 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
CACNA1C-227ENST00000491104 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 FAM196BA6NMK8 535 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 TOMM70O94826 608 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 STK11IPQ8N1F8 1099 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 SMC1BQ8NDV3 1235 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 LSG1Q9H089 658 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 NAPBQ9H115 298 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 ZNF408Q9H9D4 720 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 ANO2Q9NQ90 1003 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 MYH8P13535 1937 aa12.87□□□□□ -0.35
CACNA1C-227ENST00000491104 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 USP17L21D6R901 530 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 ITGBL1O95965 494 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 PRKG1Q13976 671 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 MIGA2Q7L4E1 593 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 DYNLL2Q96FJ2 89 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 DDRGK1Q96HY6 314 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 CSRNP1Q96S65 589 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 PPP2R3BQ9Y5P8 575 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 OTOFQ9HC10 1997 aa12.86□□□□□ -0.35
CACNA1C-227ENST00000491104 MINDY4BA8MYZ0 360 aa12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 FGAP02671 866 aa12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 PLCD1P51178 756 aa12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 HAND2P61296 217 aa12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 CTDSPL2Q05D32 466 aa12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 GIMAP6Q6P9H5 292 aa12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 DNAJC18Q9H819 358 aa12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 ARPP21Q9UBL0 812 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-227ENST00000491104 PAPPA2Q9BXP8 1791 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 ATAD5Q96QE3 1844 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 SEC24BO95487 1268 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 PPARAQ07869 468 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 ALX1Q15699 326 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
CACNA1C-227ENST00000491104 MOB2Q70IA6 237 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms