RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 LAMB1P07942 1786 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 FKTNO75072 461 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 WDHD1O75717 1129 aaPredicted RBP16.66■□□□□ 0.26
TRAIP-211ENST00000491060 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
TRAIP-211ENST00000491060 SOX10P56693 466 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 GSTO1P78417 241 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 ADGRA1Q86SQ6 560 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.66■□□□□ 0.26
TRAIP-211ENST00000491060 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 PDS5AQ29RF7 1337 aaKnown RBP16.66■□□□□ 0.26
TRAIP-211ENST00000491060 ATAD5Q96QE3 1844 aa16.66■□□□□ 0.26
TRAIP-211ENST00000491060 RPAP1Q9BWH6 1393 aaPredicted RBP16.65■□□□□ 0.26
TRAIP-211ENST00000491060 IRF6O14896 467 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 SMARCA5O60264 1052 aaPredicted RBP16.65■□□□□ 0.26
TRAIP-211ENST00000491060 LDHCP07864 332 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 DYNLL1P63167 89 aaKnown RBP16.65■□□□□ 0.26
TRAIP-211ENST00000491060 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
TRAIP-211ENST00000491060 MAPKAPK5Q8IW41 473 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 SIRT2Q8IXJ6 389 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 CD99L2Q8TCZ2 262 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
TRAIP-211ENST00000491060 SAP30BPQ9UHR5 308 aaKnown RBP16.65■□□□□ 0.26
TRAIP-211ENST00000491060 GPR75-ASB3A0A0A6YYF3 556 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 GTF2A2P52657 109 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 RHBDL3P58872 404 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 ERO1BQ86YB8 467 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 ERC1Q8IUD2 1116 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 MIGA1Q8NAN2 632 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 MS4A4AQ96JQ5 239 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
TRAIP-211ENST00000491060 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 DOCK1Q14185 1865 aa16.64■□□□□ 0.25
TRAIP-211ENST00000491060 ALDH1A1P00352 501 aa16.63■□□□□ 0.25
TRAIP-211ENST00000491060 CYP7A1P22680 504 aa16.63■□□□□ 0.25
TRAIP-211ENST00000491060 INHBEP58166 350 aa16.63■□□□□ 0.25
TRAIP-211ENST00000491060 TGFBRAP1Q8WUH2 860 aa16.63■□□□□ 0.25
TRAIP-211ENST00000491060 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
TRAIP-211ENST00000491060 TRIM17Q9Y577 477 aa16.63■□□□□ 0.25
TRAIP-211ENST00000491060 MYH1P12882 1939 aa16.62■□□□□ 0.25
TRAIP-211ENST00000491060 UNCXA6NJT0 531 aa16.62■□□□□ 0.25
TRAIP-211ENST00000491060 HMMRO75330 724 aa16.62■□□□□ 0.25
TRAIP-211ENST00000491060 ENTPD3O75355 529 aa16.62■□□□□ 0.25
TRAIP-211ENST00000491060 IFIT2P09913 472 aaKnown RBP16.62■□□□□ 0.25
TRAIP-211ENST00000491060 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
TRAIP-211ENST00000491060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRAIP-211ENST00000491060 RFX7Q2KHR2 1363 aa16.62■□□□□ 0.25
TRAIP-211ENST00000491060 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 PPIL2Q13356 520 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 SNAPC2Q13487 334 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 GADL1Q6ZQY3 521 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
TRAIP-211ENST00000491060 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
TRAIP-211ENST00000491060 FAM163AQ96GL9 167 aaPredicted RBP16.61■□□□□ 0.25
TRAIP-211ENST00000491060 PICK1Q9NRD5 415 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 HPS5Q9UPZ3 1129 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
TRAIP-211ENST00000491060 CETPP11597 493 aa16.6■□□□□ 0.25
TRAIP-211ENST00000491060 HSP90AB4PQ58FF6 505 aa16.6■□□□□ 0.25
TRAIP-211ENST00000491060 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
TRAIP-211ENST00000491060 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
TRAIP-211ENST00000491060 ZFYVE28Q9HCC9 887 aa16.6■□□□□ 0.25
TRAIP-211ENST00000491060 ZHX2Q9Y6X8 837 aa16.6■□□□□ 0.25
TRAIP-211ENST00000491060 PHIPQ8WWQ0 1821 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 TESPA1A2RU30 521 aaPredicted RBP16.59■□□□□ 0.25
TRAIP-211ENST00000491060 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 GOLIM4O00461 696 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 BAG3O95817 575 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
TRAIP-211ENST00000491060 CAP1Q01518 475 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 PPATQ06203 517 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 CPA4Q9UI42 421 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 ATRNL1Q5VV63 1379 aa16.59■□□□□ 0.25
TRAIP-211ENST00000491060 PHF20L1A8MW92 1017 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 SP3Q02447 781 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 TRIM34Q9BYJ4 488 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 PTPRFP10586 1907 aa16.58■□□□□ 0.24
TRAIP-211ENST00000491060 PDHXO00330 501 aa16.57■□□□□ 0.24
TRAIP-211ENST00000491060 GDF11O95390 407 aa16.57■□□□□ 0.24
TRAIP-211ENST00000491060 USP5P45974 858 aa16.57■□□□□ 0.24
TRAIP-211ENST00000491060 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
TRAIP-211ENST00000491060 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
TRAIP-211ENST00000491060 SHROOM1Q2M3G4 852 aaPredicted RBP16.57■□□□□ 0.24
TRAIP-211ENST00000491060 OTOP1Q7RTM1 612 aa16.57■□□□□ 0.24
TRAIP-211ENST00000491060 ERO1AQ96HE7 468 aa16.57■□□□□ 0.24
TRAIP-211ENST00000491060 ARHGAP39Q9C0H5 1083 aa16.57■□□□□ 0.24
TRAIP-211ENST00000491060 NAV1Q8NEY1 1877 aa16.56■□□□□ 0.24
TRAIP-211ENST00000491060 FLT1P17948 1338 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms