RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 PTPRAP18433 802 aa24.6■■□□□ 1.53
UPK3B-205ENST00000490360 FLT3LGP49771 235 aa24.6■■□□□ 1.53
UPK3B-205ENST00000490360 ZGPATQ8N5A5 531 aaKnown RBP24.6■■□□□ 1.53
UPK3B-205ENST00000490360 IDI2Q9BXS1 227 aa24.6■■□□□ 1.53
UPK3B-205ENST00000490360 USP44Q9H0E7 712 aa24.6■■□□□ 1.53
UPK3B-205ENST00000490360 DOCK2Q92608 1830 aa24.59■■□□□ 1.53
UPK3B-205ENST00000490360 TNPO2O14787 897 aaKnown RBP24.59■■□□□ 1.53
UPK3B-205ENST00000490360 PRDX5P30044 214 aa24.59■■□□□ 1.53
UPK3B-205ENST00000490360 SLC17A8Q8NDX2 589 aa24.59■■□□□ 1.53
UPK3B-205ENST00000490360 SMCR8Q8TEV9 937 aaPredicted RBP24.59■■□□□ 1.53
UPK3B-205ENST00000490360 DENND2AQ9ULE3 1009 aa24.59■■□□□ 1.53
UPK3B-205ENST00000490360 AFG3L2Q9Y4W6 797 aa24.59■■□□□ 1.53
UPK3B-205ENST00000490360 CTNND1O60716 968 aaKnown RBP24.58■■□□□ 1.53
UPK3B-205ENST00000490360 INHAP05111 366 aa24.58■■□□□ 1.53
UPK3B-205ENST00000490360 MAP3K10Q02779 954 aa24.58■■□□□ 1.53
UPK3B-205ENST00000490360 LRRFIP2Q9Y608 721 aaKnown RBP24.58■■□□□ 1.53
UPK3B-205ENST00000490360 ATRNL1Q5VV63 1379 aa24.57■■□□□ 1.52
UPK3B-205ENST00000490360 RFX5P48382 616 aaPredicted RBP24.57■■□□□ 1.52
UPK3B-205ENST00000490360 GADL1Q6ZQY3 521 aa24.57■■□□□ 1.52
UPK3B-205ENST00000490360 SLF2Q8IX21 1173 aa24.57■■□□□ 1.52
UPK3B-205ENST00000490360 MRPL50Q8N5N7 158 aaKnown RBP24.57■■□□□ 1.52
UPK3B-205ENST00000490360 COA7Q96BR5 231 aa24.57■■□□□ 1.52
UPK3B-205ENST00000490360 PAK6Q9NQU5 681 aaPredicted RBP24.57■■□□□ 1.52
UPK3B-205ENST00000490360 CIAO1O76071 339 aa24.56■■□□□ 1.52
UPK3B-205ENST00000490360 RGS3P49796 1198 aa24.56■■□□□ 1.52
UPK3B-205ENST00000490360 DEFB118Q96PH6 123 aa24.56■■□□□ 1.52
UPK3B-205ENST00000490360 CRISPLD2Q9H0B8 497 aa24.56■■□□□ 1.52
UPK3B-205ENST00000490360 CEP126Q9P2H0 1117 aa24.56■■□□□ 1.52
UPK3B-205ENST00000490360 PTPRFP10586 1907 aa24.56■■□□□ 1.52
UPK3B-205ENST00000490360 MYH2Q9UKX2 1941 aa24.55■■□□□ 1.52
UPK3B-205ENST00000490360 DLL1O00548 723 aa24.55■■□□□ 1.52
UPK3B-205ENST00000490360 ELNP15502 786 aa24.55■■□□□ 1.52
UPK3B-205ENST00000490360 ATP2B3Q16720 1220 aa24.55■■□□□ 1.52
UPK3B-205ENST00000490360 ATG9AQ7Z3C6 839 aa24.55■■□□□ 1.52
UPK3B-205ENST00000490360 ZSCAN29Q8IWY8 852 aaPredicted RBP24.55■■□□□ 1.52
UPK3B-205ENST00000490360 ZFPM1Q8IX07 1006 aa24.55■■□□□ 1.52
UPK3B-205ENST00000490360 PNMA3Q9UL41 463 aa24.55■■□□□ 1.52
UPK3B-205ENST00000490360 A0A0C4DFX4 3053 aa24.54■■□□□ 1.52
UPK3B-205ENST00000490360 COL6A3P12111 3177 aa24.54■■□□□ 1.52
UPK3B-205ENST00000490360 NECAB2Q7Z6G3 386 aa24.54■■□□□ 1.52
UPK3B-205ENST00000490360 ANKLE1Q8NAG6 615 aa24.54■■□□□ 1.52
UPK3B-205ENST00000490360 AGTPBP1Q9UPW5 1226 aa24.54■■□□□ 1.52
UPK3B-205ENST00000490360 GAKO14976 1311 aa24.54■■□□□ 1.52
UPK3B-205ENST00000490360 DOCK1Q14185 1865 aa24.53■■□□□ 1.52
UPK3B-205ENST00000490360 ANP32CO43423 234 aa24.53■■□□□ 1.52
UPK3B-205ENST00000490360 GPR153Q6NV75 609 aa24.53■■□□□ 1.52
UPK3B-205ENST00000490360 BMP8BP34820 402 aa24.52■■□□□ 1.52
UPK3B-205ENST00000490360 FAM110CQ1W6H9 321 aa24.52■■□□□ 1.52
UPK3B-205ENST00000490360 FAM163AQ96GL9 167 aaPredicted RBP24.52■■□□□ 1.52
UPK3B-205ENST00000490360 HDAC5Q9UQL6 1122 aa24.52■■□□□ 1.52
UPK3B-205ENST00000490360 LAMA3Q16787 3333 aa24.51■■□□□ 1.51
UPK3B-205ENST00000490360 DOCK3Q8IZD9 2030 aa24.51■■□□□ 1.51
UPK3B-205ENST00000490360 SPTY2D1Q68D10 685 aaPredicted RBP24.51■■□□□ 1.51
UPK3B-205ENST00000490360 DZIP1Q86YF9 867 aaKnown RBP24.51■■□□□ 1.51
UPK3B-205ENST00000490360 PAWRQ96IZ0 340 aaKnown RBP24.51■■□□□ 1.51
UPK3B-205ENST00000490360 TBC1D2Q9BYX2 928 aa24.51■■□□□ 1.51
UPK3B-205ENST00000490360 PDS5AQ29RF7 1337 aaKnown RBP24.51■■□□□ 1.51
UPK3B-205ENST00000490360 PHIPQ8WWQ0 1821 aa24.51■■□□□ 1.51
UPK3B-205ENST00000490360 RFX7Q2KHR2 1363 aa24.51■■□□□ 1.51
UPK3B-205ENST00000490360 TRIM75PA6NK02 468 aa24.5■■□□□ 1.51
UPK3B-205ENST00000490360 TBC1D12O60347 775 aa24.5■■□□□ 1.51
UPK3B-205ENST00000490360 IL15P40933 162 aaPredicted RBP24.5■■□□□ 1.51
UPK3B-205ENST00000490360 GCLCP48506 637 aaPredicted RBP24.5■■□□□ 1.51
UPK3B-205ENST00000490360 ANKRD13CQ8N6S4 541 aa24.5■■□□□ 1.51
UPK3B-205ENST00000490360 PROCA1Q8NCQ7 364 aaPredicted RBP24.5■■□□□ 1.51
UPK3B-205ENST00000490360 STAP2Q9UGK3 403 aa24.5■■□□□ 1.51
UPK3B-205ENST00000490360 NPM3O75607 178 aaKnown RBP24.49■■□□□ 1.51
UPK3B-205ENST00000490360 PABPC4Q13310 644 aaKnown RBP eCLIP24.49■■□□□ 1.51
UPK3B-205ENST00000490360 SH3BP5LQ7L8J4 393 aa24.49■■□□□ 1.51
UPK3B-205ENST00000490360 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.49■■□□□ 1.51
UPK3B-205ENST00000490360 TAOK2Q9UL54 1235 aa24.49■■□□□ 1.51
UPK3B-205ENST00000490360 PHKA1P46020 1223 aa24.48■■□□□ 1.51
UPK3B-205ENST00000490360 SIL1Q9H173 461 aa24.48■■□□□ 1.51
UPK3B-205ENST00000490360 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
UPK3B-205ENST00000490360 DDTLA6NHG4 134 aaPredicted RBP24.47■■□□□ 1.51
UPK3B-205ENST00000490360 MAP4K4O95819 1239 aaPredicted RBP24.47■■□□□ 1.51
UPK3B-205ENST00000490360 HMGCRP04035 888 aa24.47■■□□□ 1.51
UPK3B-205ENST00000490360 SOX1O00570 391 aaPredicted RBP24.46■■□□□ 1.51
UPK3B-205ENST00000490360 UBTFL1P0CB47 393 aaPredicted RBP24.46■■□□□ 1.51
UPK3B-205ENST00000490360 CCDC102BQ68D86 513 aa24.46■■□□□ 1.51
UPK3B-205ENST00000490360 SSH1Q8WYL5 1049 aa24.46■■□□□ 1.51
UPK3B-205ENST00000490360 GDF15Q99988 308 aa24.46■■□□□ 1.51
UPK3B-205ENST00000490360 OSBPL5Q9H0X9 879 aaPredicted RBP24.46■■□□□ 1.51
UPK3B-205ENST00000490360 ALPK3Q96L96 1907 aa24.45■■□□□ 1.51
UPK3B-205ENST00000490360 RPTORQ8N122 1335 aa24.45■■□□□ 1.5
UPK3B-205ENST00000490360 MNX1P50219 401 aaPredicted RBP24.45■■□□□ 1.5
UPK3B-205ENST00000490360 LRCH3Q96II8 777 aa24.45■■□□□ 1.5
UPK3B-205ENST00000490360 NBPF3Q9H094 633 aa24.45■■□□□ 1.5
UPK3B-205ENST00000490360 HMX1Q9NP08 348 aaPredicted RBP24.45■■□□□ 1.5
UPK3B-205ENST00000490360 ABCF2Q9UG63 623 aa24.45■■□□□ 1.5
UPK3B-205ENST00000490360 CUL9Q8IWT3 2517 aa24.45■■□□□ 1.5
UPK3B-205ENST00000490360 BTDP43251 543 aa24.44■■□□□ 1.5
UPK3B-205ENST00000490360 PICALMQ13492 652 aa24.44■■□□□ 1.5
UPK3B-205ENST00000490360 ALDH1L2Q3SY69 923 aa24.44■■□□□ 1.5
UPK3B-205ENST00000490360 DDX4Q9NQI0 724 aaKnown RBP24.44■■□□□ 1.5
UPK3B-205ENST00000490360 MROH7-TTC4A0A0A0MT08 1334 aa24.43■■□□□ 1.5
UPK3B-205ENST00000490360 GPR75-ASB3A0A0A6YYF3 556 aa24.43■■□□□ 1.5
UPK3B-205ENST00000490360 E9PSI1 815 aa24.43■■□□□ 1.5
UPK3B-205ENST00000490360 RASGRF1Q13972 1273 aa24.43■■□□□ 1.5
UPK3B-205ENST00000490360 TREML2Q5T2D2 321 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms