RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 GJB1P08034 283 aa18.67■□□□□ 0.58
FAM3D-204ENST00000489857 PTPRAP18433 802 aa18.67■□□□□ 0.58
FAM3D-204ENST00000489857 RASGRF1Q13972 1273 aa18.67■□□□□ 0.58
FAM3D-204ENST00000489857 UBE2Q1Q7Z7E8 422 aa18.67■□□□□ 0.58
FAM3D-204ENST00000489857 COPRSQ9NQ92 184 aa18.67■□□□□ 0.58
FAM3D-204ENST00000489857 DDX4Q9NQI0 724 aaKnown RBP18.67■□□□□ 0.58
FAM3D-204ENST00000489857 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 DOCK2Q92608 1830 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 DDTLA6NHG4 134 aaPredicted RBP18.66■□□□□ 0.58
FAM3D-204ENST00000489857 GJA8P48165 433 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 FCGRTP55899 365 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 MAP3K10Q02779 954 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 FASTKD5Q7L8L6 764 aaKnown RBP18.66■□□□□ 0.58
FAM3D-204ENST00000489857 TRMT2AQ8IZ69 625 aaKnown RBP18.66■□□□□ 0.58
FAM3D-204ENST00000489857 NKX2-3Q8TAU0 364 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 PICK1Q9NRD5 415 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 NOB1Q9ULX3 412 aaKnown RBP18.66■□□□□ 0.58
FAM3D-204ENST00000489857 GABRQQ9UN88 632 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 AFG3L2Q9Y4W6 797 aa18.66■□□□□ 0.58
FAM3D-204ENST00000489857 CHRDL2Q6WN34 429 aa18.65■□□□□ 0.58
FAM3D-204ENST00000489857 GADL1Q6ZQY3 521 aa18.65■□□□□ 0.58
FAM3D-204ENST00000489857 DZIP1Q86YF9 867 aaKnown RBP18.65■□□□□ 0.58
FAM3D-204ENST00000489857 ZSCAN29Q8IWY8 852 aaPredicted RBP18.65■□□□□ 0.58
FAM3D-204ENST00000489857 ZGPATQ8N5A5 531 aaKnown RBP18.65■□□□□ 0.58
FAM3D-204ENST00000489857 MEIS3Q99687 375 aa18.65■□□□□ 0.58
FAM3D-204ENST00000489857 RNF208Q9H0X6 261 aa18.65■□□□□ 0.58
FAM3D-204ENST00000489857 BIN2Q9UBW5 565 aaPredicted RBP18.65■□□□□ 0.58
FAM3D-204ENST00000489857 ABCF2Q9UG63 623 aa18.65■□□□□ 0.58
FAM3D-204ENST00000489857 PDS5AQ29RF7 1337 aaKnown RBP18.65■□□□□ 0.58
FAM3D-204ENST00000489857 BTDP43251 543 aa18.64■□□□□ 0.57
FAM3D-204ENST00000489857 TIMM10P62072 90 aa18.64■□□□□ 0.57
FAM3D-204ENST00000489857 UBXN2AP68543 259 aa18.64■□□□□ 0.57
FAM3D-204ENST00000489857 CCDC84Q86UT8 332 aaPredicted RBP18.64■□□□□ 0.57
FAM3D-204ENST00000489857 SLAIN1Q8ND83 568 aa18.64■□□□□ 0.57
FAM3D-204ENST00000489857 DPF3Q92784 378 aa18.64■□□□□ 0.57
FAM3D-204ENST00000489857 FAM163AQ96GL9 167 aaPredicted RBP18.64■□□□□ 0.57
FAM3D-204ENST00000489857 API5Q9BZZ5 524 aaKnown RBP18.64■□□□□ 0.57
FAM3D-204ENST00000489857 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.64■□□□□ 0.57
FAM3D-204ENST00000489857 MYH2Q9UKX2 1941 aa18.63■□□□□ 0.57
FAM3D-204ENST00000489857 PICALMQ13492 652 aa18.63■□□□□ 0.57
FAM3D-204ENST00000489857 ZNF384Q8TF68 577 aa18.63■□□□□ 0.57
FAM3D-204ENST00000489857 U2AF1L4Q8WU68 220 aaKnown RBP18.63■□□□□ 0.57
FAM3D-204ENST00000489857 UNC93B1Q9H1C4 597 aa18.63■□□□□ 0.57
FAM3D-204ENST00000489857 SLC45A1Q9Y2W3 748 aa18.63■□□□□ 0.57
FAM3D-204ENST00000489857 CTNND1O60716 968 aaKnown RBP18.62■□□□□ 0.57
FAM3D-204ENST00000489857 FLT3LGP49771 235 aa18.62■□□□□ 0.57
FAM3D-204ENST00000489857 RHBDL3P58872 404 aa18.62■□□□□ 0.57
FAM3D-204ENST00000489857 SLF2Q8IX21 1173 aa18.62■□□□□ 0.57
FAM3D-204ENST00000489857 HDAC5Q9UQL6 1122 aa18.62■□□□□ 0.57
FAM3D-204ENST00000489857 MROH7-TTC4A0A0A0MT08 1334 aa18.62■□□□□ 0.57
FAM3D-204ENST00000489857 A0A1B0GUL7 405 aa18.61■□□□□ 0.57
FAM3D-204ENST00000489857 TRIM75PA6NK02 468 aa18.61■□□□□ 0.57
FAM3D-204ENST00000489857 ADCY3O60266 1144 aa18.61■□□□□ 0.57
FAM3D-204ENST00000489857 ELNP15502 786 aa18.61■□□□□ 0.57
FAM3D-204ENST00000489857 TFCP2Q12800 502 aa18.61■□□□□ 0.57
FAM3D-204ENST00000489857 SPTY2D1Q68D10 685 aaPredicted RBP18.61■□□□□ 0.57
FAM3D-204ENST00000489857 XAGE2Q96GT9 111 aa18.61■□□□□ 0.57
FAM3D-204ENST00000489857 RBM27Q9P2N5 1060 aaKnown RBP18.61■□□□□ 0.57
FAM3D-204ENST00000489857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.61■□□□□ 0.57
FAM3D-204ENST00000489857 MGAMO43451 1857 aa18.6■□□□□ 0.57
FAM3D-204ENST00000489857 DOCK1Q14185 1865 aa18.6■□□□□ 0.57
FAM3D-204ENST00000489857 GPR75-ASB3A0A0A6YYF3 556 aa18.6■□□□□ 0.57
FAM3D-204ENST00000489857 CT47B1P0C2W7 299 aaPredicted RBP18.6■□□□□ 0.57
FAM3D-204ENST00000489857 MECOMQ03112 1051 aa18.6■□□□□ 0.57
FAM3D-204ENST00000489857 SMCR8Q8TEV9 937 aaPredicted RBP18.6■□□□□ 0.57
FAM3D-204ENST00000489857 HTATIP2Q9BUP3 242 aa18.6■□□□□ 0.57
FAM3D-204ENST00000489857 PHIPQ8WWQ0 1821 aa18.6■□□□□ 0.57
FAM3D-204ENST00000489857 PTPRFP10586 1907 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 FAM196BA6NMK8 535 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 TNPO2O14787 897 aaKnown RBP18.59■□□□□ 0.57
FAM3D-204ENST00000489857 SRGAP3O43295 1099 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 FARP2O94887 1054 aaPredicted RBP18.59■□□□□ 0.57
FAM3D-204ENST00000489857 SGPL1O95470 568 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 INHAP05111 366 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
FAM3D-204ENST00000489857 TREML2Q5T2D2 321 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 PXYLP1Q8TE99 480 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 AGTPBP1Q9UPW5 1226 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 AKAP2Q9Y2D5 859 aa18.59■□□□□ 0.57
FAM3D-204ENST00000489857 TBC1D12O60347 775 aa18.58■□□□□ 0.56
FAM3D-204ENST00000489857 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
FAM3D-204ENST00000489857 MTX1Q13505 466 aa18.58■□□□□ 0.56
FAM3D-204ENST00000489857 IRF5Q13568 498 aa18.58■□□□□ 0.56
FAM3D-204ENST00000489857 PI16Q6UXB8 463 aa18.58■□□□□ 0.56
FAM3D-204ENST00000489857 ERICH6Q7L0X2 663 aa18.58■□□□□ 0.56
FAM3D-204ENST00000489857 PRO3102Q9H379 93 aa18.58■□□□□ 0.56
FAM3D-204ENST00000489857 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.56
FAM3D-204ENST00000489857 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
FAM3D-204ENST00000489857 ANKRD13CQ8N6S4 541 aa18.57■□□□□ 0.56
FAM3D-204ENST00000489857 NSUN4Q96CB9 384 aaKnown RBP18.57■□□□□ 0.56
FAM3D-204ENST00000489857 ZBTB7BO15156 539 aaPredicted RBP18.56■□□□□ 0.56
FAM3D-204ENST00000489857 GNAI3P08754 354 aa18.56■□□□□ 0.56
FAM3D-204ENST00000489857 RRP1BQ14684 758 aaKnown RBP18.56■□□□□ 0.56
FAM3D-204ENST00000489857 TBC1D9Q6ZT07 1266 aa18.56■□□□□ 0.56
FAM3D-204ENST00000489857 NEUROD6Q96NK8 337 aa18.56■□□□□ 0.56
FAM3D-204ENST00000489857 DEFB118Q96PH6 123 aa18.56■□□□□ 0.56
FAM3D-204ENST00000489857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.56■□□□□ 0.56
FAM3D-204ENST00000489857 NR2E3Q9Y5X4 410 aa18.56■□□□□ 0.56
FAM3D-204ENST00000489857 COL2A1P02458 1487 aaPredicted RBP18.55■□□□□ 0.56
FAM3D-204ENST00000489857 SPP2Q13103 211 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms