RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 ZNF112Q9UJU3 913 aa21.79■■□□□ 1.08
ABCF3-217ENST00000489719 SPDYE5A6NIY4 337 aa21.78■■□□□ 1.08
ABCF3-217ENST00000489719 IFIT2P09913 472 aaKnown RBP21.78■■□□□ 1.08
ABCF3-217ENST00000489719 RHBDL3P58872 404 aa21.78■■□□□ 1.08
ABCF3-217ENST00000489719 NOM1Q5C9Z4 860 aaKnown RBP21.78■■□□□ 1.08
ABCF3-217ENST00000489719 ZNF296Q8WUU4 475 aaPredicted RBP21.78■■□□□ 1.08
ABCF3-217ENST00000489719 MS4A4AQ96JQ5 239 aa21.78■■□□□ 1.08
ABCF3-217ENST00000489719 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
ABCF3-217ENST00000489719 SNCAIPQ9Y6H5 919 aa21.78■■□□□ 1.08
ABCF3-217ENST00000489719 IGF2BP3O00425 579 aaKnown RBP eCLIP21.77■■□□□ 1.08
ABCF3-217ENST00000489719 NPM3O75607 178 aaKnown RBP21.77■■□□□ 1.08
ABCF3-217ENST00000489719 PLCG2P16885 1265 aa21.77■■□□□ 1.08
ABCF3-217ENST00000489719 INPP5BP32019 993 aa21.77■■□□□ 1.08
ABCF3-217ENST00000489719 DDX4Q9NQI0 724 aaKnown RBP21.77■■□□□ 1.08
ABCF3-217ENST00000489719 CCL15-CCL14A0A0B4J2E2 113 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 FKTNO75072 461 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 PPATQ06203 517 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 CCL15Q16663 113 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 CTU1Q7Z7A3 348 aaKnown RBP21.76■■□□□ 1.07
ABCF3-217ENST00000489719 TEX11Q8IYF3 940 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 PTPN18Q99952 460 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 R3HDMLQ9H3Y0 253 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 PIH1D3Q9NQM4 214 aaKnown RBP21.76■■□□□ 1.07
ABCF3-217ENST00000489719 MYH13Q9UKX3 1938 aa21.76■■□□□ 1.07
ABCF3-217ENST00000489719 DDTLA6NHG4 134 aaPredicted RBP21.75■■□□□ 1.07
ABCF3-217ENST00000489719 IDH1O75874 414 aaKnown RBP21.75■■□□□ 1.07
ABCF3-217ENST00000489719 CETPP11597 493 aa21.75■■□□□ 1.07
ABCF3-217ENST00000489719 PPIL2Q13356 520 aa21.75■■□□□ 1.07
ABCF3-217ENST00000489719 SNAPC2Q13487 334 aa21.75■■□□□ 1.07
ABCF3-217ENST00000489719 SH3BP5LQ7L8J4 393 aa21.75■■□□□ 1.07
ABCF3-217ENST00000489719 AATFQ9NY61 560 aaKnown RBP eCLIP21.75■■□□□ 1.07
ABCF3-217ENST00000489719 CCDC85CA6NKD9 419 aa21.74■■□□□ 1.07
ABCF3-217ENST00000489719 IRF6O14896 467 aa21.74■■□□□ 1.07
ABCF3-217ENST00000489719 PPP4CP60510 307 aa21.74■■□□□ 1.07
ABCF3-217ENST00000489719 SH3RF3Q8TEJ3 882 aaPredicted RBP21.74■■□□□ 1.07
ABCF3-217ENST00000489719 BRI3BPQ8WY22 251 aa21.74■■□□□ 1.07
ABCF3-217ENST00000489719 AKAP11Q9UKA4 1901 aa21.73■■□□□ 1.07
ABCF3-217ENST00000489719 CYP7A1P22680 504 aa21.73■■□□□ 1.07
ABCF3-217ENST00000489719 MAP3K10Q02779 954 aa21.73■■□□□ 1.07
ABCF3-217ENST00000489719 MAP3K12Q12852 859 aa21.73■■□□□ 1.07
ABCF3-217ENST00000489719 PICK1Q9NRD5 415 aa21.73■■□□□ 1.07
ABCF3-217ENST00000489719 TTF1Q15361 905 aaPredicted RBP21.72■■□□□ 1.07
ABCF3-217ENST00000489719 PKN2Q16513 984 aaKnown RBP21.72■■□□□ 1.07
ABCF3-217ENST00000489719 NOL9Q5SY16 702 aaKnown RBP21.72■■□□□ 1.07
ABCF3-217ENST00000489719 OSBPL5Q9H0X9 879 aaPredicted RBP21.72■■□□□ 1.07
ABCF3-217ENST00000489719 ZFYVE28Q9HCC9 887 aa21.72■■□□□ 1.07
ABCF3-217ENST00000489719 NDUFB9Q9Y6M9 179 aa21.72■■□□□ 1.07
ABCF3-217ENST00000489719 CASP8AP2Q9UKL3 1982 aa21.72■■□□□ 1.07
ABCF3-217ENST00000489719 PHF20L1A8MW92 1017 aa21.71■■□□□ 1.07
ABCF3-217ENST00000489719 TBC1D12O60347 775 aa21.71■■□□□ 1.07
ABCF3-217ENST00000489719 CRHR2Q13324 411 aa21.71■■□□□ 1.07
ABCF3-217ENST00000489719 TGFBRAP1Q8WUH2 860 aa21.71■■□□□ 1.07
ABCF3-217ENST00000489719 ANTXR1Q9H6X2 564 aa21.71■■□□□ 1.07
ABCF3-217ENST00000489719 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.71■■□□□ 1.07
ABCF3-217ENST00000489719 CTNND1O60716 968 aaKnown RBP21.7■■□□□ 1.06
ABCF3-217ENST00000489719 TAF1CQ15572 869 aaPredicted RBP21.7■■□□□ 1.06
ABCF3-217ENST00000489719 TMED8Q6PL24 325 aaPredicted RBP21.7■■□□□ 1.06
ABCF3-217ENST00000489719 SCYL3Q8IZE3 742 aa21.7■■□□□ 1.06
ABCF3-217ENST00000489719 MAGEB6Q8N7X4 407 aa21.7■■□□□ 1.06
ABCF3-217ENST00000489719 LRRCC1Q9C099 1032 aa21.7■■□□□ 1.06
ABCF3-217ENST00000489719 DHX36Q9H2U1 1008 aaKnown RBP21.7■■□□□ 1.06
ABCF3-217ENST00000489719 RFX7Q2KHR2 1363 aa21.7■■□□□ 1.06
ABCF3-217ENST00000489719 MYH2Q9UKX2 1941 aa21.69■■□□□ 1.06
ABCF3-217ENST00000489719 ADGRA1Q86SQ6 560 aa21.69■■□□□ 1.06
ABCF3-217ENST00000489719 CERS3Q8IU89 383 aa21.69■■□□□ 1.06
ABCF3-217ENST00000489719 FAM43AQ8N2R8 423 aa21.69■■□□□ 1.06
ABCF3-217ENST00000489719 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.69■■□□□ 1.06
ABCF3-217ENST00000489719 PI4KBQ9UBF8 816 aa21.69■■□□□ 1.06
ABCF3-217ENST00000489719 ZHX2Q9Y6X8 837 aa21.69■■□□□ 1.06
ABCF3-217ENST00000489719 CXCL11O14625 94 aa21.68■■□□□ 1.06
ABCF3-217ENST00000489719 RRP1P56182 461 aaKnown RBP21.68■■□□□ 1.06
ABCF3-217ENST00000489719 MAPKAPK5Q8IW41 473 aa21.68■■□□□ 1.06
ABCF3-217ENST00000489719 DNAJC2Q99543 621 aaKnown RBP21.68■■□□□ 1.06
ABCF3-217ENST00000489719 ZCCHC17Q9NP64 241 aaKnown RBP21.68■■□□□ 1.06
ABCF3-217ENST00000489719 ATRNL1Q5VV63 1379 aa21.68■■□□□ 1.06
ABCF3-217ENST00000489719 BTBD19C9JJ37 291 aa21.67■■□□□ 1.06
ABCF3-217ENST00000489719 SLURP2P0DP57 97 aa21.67■■□□□ 1.06
ABCF3-217ENST00000489719 PTPRAP18433 802 aa21.67■■□□□ 1.06
ABCF3-217ENST00000489719 DYNLL1P63167 89 aaKnown RBP21.67■■□□□ 1.06
ABCF3-217ENST00000489719 SP3Q02447 781 aa21.67■■□□□ 1.06
ABCF3-217ENST00000489719 MIGA1Q8NAN2 632 aa21.67■■□□□ 1.06
ABCF3-217ENST00000489719 ERO1AQ96HE7 468 aa21.67■■□□□ 1.06
ABCF3-217ENST00000489719 KCNH4Q9UQ05 1017 aa21.67■■□□□ 1.06
ABCF3-217ENST00000489719 GOLIM4O00461 696 aa21.66■■□□□ 1.06
ABCF3-217ENST00000489719 USP5P45974 858 aa21.66■■□□□ 1.06
ABCF3-217ENST00000489719 FOXP4Q8IVH2 680 aaPredicted RBP21.66■■□□□ 1.06
ABCF3-217ENST00000489719 TRIM34Q9BYJ4 488 aa21.66■■□□□ 1.06
ABCF3-217ENST00000489719 BOLA2Q9H3K6 86 aa21.66■■□□□ 1.06
ABCF3-217ENST00000489719 DCTPP1Q9H773 170 aa21.66■■□□□ 1.06
ABCF3-217ENST00000489719 HERC5Q9UII4 1024 aaKnown RBP21.66■■□□□ 1.06
ABCF3-217ENST00000489719 SMARCA5O60264 1052 aaPredicted RBP21.65■■□□□ 1.06
ABCF3-217ENST00000489719 ATP5JP18859 108 aa21.65■■□□□ 1.06
ABCF3-217ENST00000489719 ARHGEF6Q15052 776 aa21.65■■□□□ 1.06
ABCF3-217ENST00000489719 SLC9C2Q5TAH2 1124 aa21.65■■□□□ 1.06
ABCF3-217ENST00000489719 FAM196BA6NMK8 535 aa21.64■■□□□ 1.05
ABCF3-217ENST00000489719 FASTKD5Q7L8L6 764 aaKnown RBP21.64■■□□□ 1.05
ABCF3-217ENST00000489719 ANKRD23Q86SG2 305 aa21.64■■□□□ 1.05
ABCF3-217ENST00000489719 CRACR2BQ8N4Y2 399 aaPredicted RBP21.64■■□□□ 1.05
ABCF3-217ENST00000489719 TRIM17Q9Y577 477 aa21.64■■□□□ 1.05
ABCF3-217ENST00000489719 AK9Q5TCS8 1911 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms