RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
GGPS1-207ENST00000489692 SNCAIPQ9Y6H5 919 aa14.35□□□□□ -0.11
GGPS1-207ENST00000489692 FPGT-TNNI3KV9GXZ4 949 aa14.35□□□□□ -0.11
GGPS1-207ENST00000489692 PDS5AQ29RF7 1337 aaKnown RBP14.35□□□□□ -0.11
GGPS1-207ENST00000489692 ZBTB7BO15156 539 aaPredicted RBP14.34□□□□□ -0.11
GGPS1-207ENST00000489692 SNAPC2Q13487 334 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
GGPS1-207ENST00000489692 ZFPM1Q8IX07 1006 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 SSH3Q8TE77 659 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 ERO1AQ96HE7 468 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 PTPN18Q99952 460 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 DBNDD2Q9BQY9 259 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 CFHR5Q9BXR6 569 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 ZFYVE28Q9HCC9 887 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 MROH7-TTC4A0A0A0MT08 1334 aa14.34□□□□□ -0.11
GGPS1-207ENST00000489692 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
GGPS1-207ENST00000489692 CASP8AP2Q9UKL3 1982 aa14.33□□□□□ -0.12
GGPS1-207ENST00000489692 ENTPD3O75355 529 aa14.33□□□□□ -0.12
GGPS1-207ENST00000489692 ARID4AP29374 1257 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-207ENST00000489692 FBXO46Q6PJ61 603 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-207ENST00000489692 CD99L2Q8TCZ2 262 aa14.33□□□□□ -0.12
GGPS1-207ENST00000489692 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
GGPS1-207ENST00000489692 GAKO14976 1311 aa14.33□□□□□ -0.12
GGPS1-207ENST00000489692 TESPA1A2RU30 521 aaPredicted RBP14.32□□□□□ -0.12
GGPS1-207ENST00000489692 IRF6O14896 467 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 MCAMP43121 646 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 SP3Q02447 781 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 PPATQ06203 517 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 PPIL2Q13356 520 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 FAM43AQ8N2R8 423 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 CCDC8Q9H0W5 538 aaPredicted RBP14.32□□□□□ -0.12
GGPS1-207ENST00000489692 GPR108Q9NPR9 543 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 PICK1Q9NRD5 415 aa14.32□□□□□ -0.12
GGPS1-207ENST00000489692 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
GGPS1-207ENST00000489692 APBB1O00213 710 aa14.31□□□□□ -0.12
GGPS1-207ENST00000489692 ECM2O94769 699 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-207ENST00000489692 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
GGPS1-207ENST00000489692 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-207ENST00000489692 CEP85Q6P2H3 762 aa14.31□□□□□ -0.12
GGPS1-207ENST00000489692 NSUN4Q96CB9 384 aaKnown RBP14.31□□□□□ -0.12
GGPS1-207ENST00000489692 FAM163AQ96GL9 167 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-207ENST00000489692 EFCC1Q9HA90 598 aa14.31□□□□□ -0.12
GGPS1-207ENST00000489692 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
GGPS1-207ENST00000489692 ARAP2Q8WZ64 1704 aa14.3□□□□□ -0.12
GGPS1-207ENST00000489692 GPR75-ASB3A0A0A6YYF3 556 aa14.3□□□□□ -0.12
GGPS1-207ENST00000489692 BTBD19C9JJ37 291 aa14.3□□□□□ -0.12
GGPS1-207ENST00000489692 ZBTB22O15209 634 aa14.3□□□□□ -0.12
GGPS1-207ENST00000489692 BAG3O95817 575 aa14.3□□□□□ -0.12
GGPS1-207ENST00000489692 KIF22Q14807 665 aa14.3□□□□□ -0.12
GGPS1-207ENST00000489692 TEX11Q8IYF3 940 aa14.3□□□□□ -0.12
GGPS1-207ENST00000489692 DDX4Q9NQI0 724 aaKnown RBP14.3□□□□□ -0.12
GGPS1-207ENST00000489692 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
GGPS1-207ENST00000489692 ZAP70P43403 619 aa14.29□□□□□ -0.12
GGPS1-207ENST00000489692 HSP90AB4PQ58FF6 505 aa14.29□□□□□ -0.12
GGPS1-207ENST00000489692 OTOP1Q7RTM1 612 aa14.29□□□□□ -0.12
GGPS1-207ENST00000489692 AACSQ86V21 672 aa14.29□□□□□ -0.12
GGPS1-207ENST00000489692 ERC1Q8IUD2 1116 aa14.29□□□□□ -0.12
GGPS1-207ENST00000489692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.29□□□□□ -0.12
GGPS1-207ENST00000489692 AATFQ9NY61 560 aaKnown RBP eCLIP14.29□□□□□ -0.12
GGPS1-207ENST00000489692 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
GGPS1-207ENST00000489692 ZNF112Q9UJU3 913 aa14.29□□□□□ -0.12
GGPS1-207ENST00000489692 ZHX2Q9Y6X8 837 aa14.29□□□□□ -0.12
GGPS1-207ENST00000489692 HMMRO75330 724 aa14.28□□□□□ -0.12
GGPS1-207ENST00000489692 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
GGPS1-207ENST00000489692 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
GGPS1-207ENST00000489692 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
GGPS1-207ENST00000489692 TRIM34Q9BYJ4 488 aa14.28□□□□□ -0.12
GGPS1-207ENST00000489692 IL1RAPL2Q9NP60 686 aa14.28□□□□□ -0.12
GGPS1-207ENST00000489692 DBNLQ9UJU6 430 aaKnown RBP14.28□□□□□ -0.12
GGPS1-207ENST00000489692 AKAP11Q9UKA4 1901 aa14.28□□□□□ -0.12
GGPS1-207ENST00000489692 ECM29Q5VYK3 1845 aa14.27□□□□□ -0.12
GGPS1-207ENST00000489692 PDHXO00330 501 aa14.27□□□□□ -0.13
GGPS1-207ENST00000489692 IDH1O75874 414 aaKnown RBP14.27□□□□□ -0.13
GGPS1-207ENST00000489692 PLCG2P16885 1265 aa14.27□□□□□ -0.13
GGPS1-207ENST00000489692 RGS19P49795 217 aa14.27□□□□□ -0.13
GGPS1-207ENST00000489692 RHBDL3P58872 404 aa14.27□□□□□ -0.13
GGPS1-207ENST00000489692 NOL9Q5SY16 702 aaKnown RBP14.27□□□□□ -0.13
GGPS1-207ENST00000489692 GADL1Q6ZQY3 521 aa14.27□□□□□ -0.13
GGPS1-207ENST00000489692 SH3RF3Q8TEJ3 882 aaPredicted RBP14.27□□□□□ -0.13
GGPS1-207ENST00000489692 ZNF384Q8TF68 577 aa14.27□□□□□ -0.13
GGPS1-207ENST00000489692 EAF2Q96CJ1 260 aaPredicted RBP14.27□□□□□ -0.13
GGPS1-207ENST00000489692 FAM196BA6NMK8 535 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 TLR2O60603 784 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 MAP4K4O95819 1239 aaPredicted RBP14.26□□□□□ -0.13
GGPS1-207ENST00000489692 CYP2E1P05181 493 aaPredicted RBP14.26□□□□□ -0.13
GGPS1-207ENST00000489692 SLURP2P0DP57 97 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 CYP7A1P22680 504 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 NUCB1Q02818 461 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 ANKRD23Q86SG2 305 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 OSBPL5Q9H0X9 879 aaPredicted RBP14.26□□□□□ -0.13
GGPS1-207ENST00000489692 ZCCHC17Q9NP64 241 aaKnown RBP14.26□□□□□ -0.13
GGPS1-207ENST00000489692 PIH1D3Q9NQM4 214 aaKnown RBP14.26□□□□□ -0.13
GGPS1-207ENST00000489692 CPA4Q9UI42 421 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 PTPN22Q9Y2R2 807 aa14.26□□□□□ -0.13
GGPS1-207ENST00000489692 TRIM75PA6NK02 468 aa14.25□□□□□ -0.13
GGPS1-207ENST00000489692 PHF20L1A8MW92 1017 aa14.25□□□□□ -0.13
GGPS1-207ENST00000489692 CTNND1O60716 968 aaKnown RBP14.25□□□□□ -0.13
GGPS1-207ENST00000489692 IFIT2P09913 472 aaKnown RBP14.25□□□□□ -0.13
GGPS1-207ENST00000489692 PTPRAP18433 802 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms