RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 GPATCH3Q96I76 525 aa14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 LNPKQ9C0E8 428 aa14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 RWDD1Q9H446 243 aaPredicted RBP14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 ELP3Q9H9T3 547 aa14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 ZNF532Q9HCE3 1301 aa14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 FAM196BA6NMK8 535 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 ENTPD3O75355 529 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 MX1P20591 662 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 NOGQ13253 232 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 SLC4A8Q2Y0W8 1093 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 SLC9C2Q5TAH2 1124 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 MAPKAPK5Q8IW41 473 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 SMC5Q8IY18 1101 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 CCDC102AQ96A19 550 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 CSRNP1Q96S65 589 aa14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 DDX60LQ5H9U9 1706 aaKnown RBP14.89□□□□□ -0.03
SMARCD3-213ENST00000489503 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 FOXN1O15353 648 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 BAG3O95817 575 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 GJA5P36382 358 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 PPP4CP60510 307 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 VGLL4Q14135 290 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 PI4K2BQ8TCG2 481 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 TGFBRAP1Q8WUH2 860 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 WRNIP1Q96S55 665 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 OSBPL5Q9H0X9 879 aaPredicted RBP14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 TSKSQ9UJT2 592 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 PCNTO95613 3336 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 FLT1P17948 1338 aa14.88□□□□□ -0.03
SMARCD3-213ENST00000489503 INPP5BP32019 993 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 MAP2K2P36507 400 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 DCAF15Q66K64 600 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 ANKRD13AQ8IZ07 590 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 ZKSCAN4Q969J2 545 aaPredicted RBP14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 SLC10A4Q96EP9 437 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 WNK4Q96J92 1243 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 ZNF341Q9BYN7 854 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 WBP1LQ9NX94 342 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 SAP30BPQ9UHR5 308 aaKnown RBP14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 MYH1P12882 1939 aa14.87□□□□□ -0.03
SMARCD3-213ENST00000489503 PLCG2P16885 1265 aa14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 ADD2P35612 726 aa14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 MAP3K9P80192 1104 aa14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 SPRYD7Q5W111 196 aa14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 LCORLQ8N3X6 602 aa14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 RIOK1Q9BRS2 568 aaKnown RBP14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 SNCAIPQ9Y6H5 919 aa14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 COL2A1P02458 1487 aaPredicted RBP14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 TTC41PQ6P2S7 1318 aa14.86□□□□□ -0.03
SMARCD3-213ENST00000489503 DOCK1Q14185 1865 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 MAGEB6P1A0A0J9YX57 407 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 MBD4O95243 580 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 MAP2K1Q02750 393 aaPredicted RBP14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 AIDAQ96BJ3 306 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 OPTNQ96CV9 577 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 HOOK2Q96ED9 719 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 ARMT1Q9H993 441 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 CSADQ9Y600 493 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 LAMB1P07942 1786 aa14.85□□□□□ -0.03
SMARCD3-213ENST00000489503 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 GLRX3O76003 335 aaKnown RBP14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 USP5P45974 858 aa14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 PDE1AP54750 535 aa14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 CHD1LQ86WJ1 897 aa14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 KBTBD3Q8NAB2 608 aa14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 OTUD5Q96G74 571 aa14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 PALD1Q9ULE6 856 aa14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
SMARCD3-213ENST00000489503 ERC2O15083 957 aa14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 IGSF3O75054 1194 aa14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 HSPA8P11142 646 aaKnown RBP14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 NUCB1Q02818 461 aa14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 EVX2Q03828 476 aa14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 SDR42E1Q8WUS8 393 aa14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 BAZ2AQ9UIF9 1905 aaKnown RBP14.83□□□□□ -0.04
SMARCD3-213ENST00000489503 PHF20L1A8MW92 1017 aa14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 PRKAB2O43741 272 aa14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 FSD1Q9BTV5 496 aa14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 BEGAINQ9BUH8 593 aa14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 PUS7LQ9H0K6 701 aaKnown RBP14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 DNAJC18Q9H819 358 aa14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 STAP2Q9UGK3 403 aa14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 ZNF112Q9UJU3 913 aa14.82□□□□□ -0.04
SMARCD3-213ENST00000489503 SPDYE5A6NIY4 337 aa14.81□□□□□ -0.04
SMARCD3-213ENST00000489503 ZBTB48P10074 688 aaPredicted RBP14.81□□□□□ -0.04
SMARCD3-213ENST00000489503 LBX1P52954 281 aa14.81□□□□□ -0.04
SMARCD3-213ENST00000489503 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
SMARCD3-213ENST00000489503 UBE3CQ15386 1083 aa14.81□□□□□ -0.04
SMARCD3-213ENST00000489503 SHROOM1Q2M3G4 852 aaPredicted RBP14.81□□□□□ -0.04
SMARCD3-213ENST00000489503 CRNKL1Q9BZJ0 848 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms