RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 DUSP27Q5VZP5 1158 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 NLRP10Q86W26 655 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 DNAJC5GQ8N7S2 189 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 CUEDC1Q9NWM3 386 aaPredicted RBP11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 CHPF2Q9P2E5 772 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 FZD9O00144 591 aa11.37□□□□□ -0.59
TNRC6B-208ENST00000489500 APAF1O14727 1248 aa11.37□□□□□ -0.59
TNRC6B-208ENST00000489500 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
TNRC6B-208ENST00000489500 DDX58O95786 925 aaKnown RBP11.37□□□□□ -0.59
TNRC6B-208ENST00000489500 EAPPQ56P03 285 aaPredicted RBP11.37□□□□□ -0.59
TNRC6B-208ENST00000489500 SV2AQ7L0J3 742 aa11.37□□□□□ -0.59
TNRC6B-208ENST00000489500 ATP6V0A2Q9Y487 856 aa11.37□□□□□ -0.59
TNRC6B-208ENST00000489500 LAMB2P55268 1798 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 A0A1W2PRU2 124 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 MEN1O00255 615 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 ANP32CO43423 234 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 EPHX2P34913 555 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 DPP8Q6V1X1 898 aaPredicted RBP11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 SP8Q8IXZ3 490 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
TNRC6B-208ENST00000489500 GRAPQ13588 217 aa11.35□□□□□ -0.59
TNRC6B-208ENST00000489500 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
TNRC6B-208ENST00000489500 GRAPLQ8TC17 118 aaPredicted RBP11.35□□□□□ -0.59
TNRC6B-208ENST00000489500 PCDHB11Q9Y5F2 797 aa11.35□□□□□ -0.59
TNRC6B-208ENST00000489500 CACNA1FO60840 1977 aa11.35□□□□□ -0.59
TNRC6B-208ENST00000489500 ABCC4O15439 1325 aa11.35□□□□□ -0.59
TNRC6B-208ENST00000489500 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
TNRC6B-208ENST00000489500 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
TNRC6B-208ENST00000489500 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
TNRC6B-208ENST00000489500 TNIP1Q15025 636 aa11.34□□□□□ -0.59
TNRC6B-208ENST00000489500 KRT24Q2M2I5 525 aa11.34□□□□□ -0.59
TNRC6B-208ENST00000489500 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
TNRC6B-208ENST00000489500 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
TNRC6B-208ENST00000489500 HTRA3P83110 453 aa11.33□□□□□ -0.6
TNRC6B-208ENST00000489500 NEXNQ0ZGT2 675 aa11.33□□□□□ -0.6
TNRC6B-208ENST00000489500 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
TNRC6B-208ENST00000489500 ZNRF3Q9ULT6 936 aa11.33□□□□□ -0.6
TNRC6B-208ENST00000489500 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 AOC3Q16853 763 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 WHAMMQ8TF30 809 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 EYA3Q99504 573 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 ISCA1Q9BUE6 129 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 OSBPL3Q9H4L5 887 aa11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
TNRC6B-208ENST00000489500 IRS4O14654 1257 aaPredicted RBP11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 SF3B3Q15393 1217 aaKnown RBP11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 ZBTB38Q8NAP3 1195 aaPredicted RBP11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 CCDC191Q8NCU4 936 aa11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 CDHR2Q9BYE9 1310 aa11.31□□□□□ -0.6
TNRC6B-208ENST00000489500 TAF1P21675 1872 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 TRPM7Q96QT4 1865 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 TRAK2O60296 914 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 GPC1P35052 558 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 KIAA2012Q0VF49 1180 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 CIAPIN1Q6FI81 312 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 AIDAQ96BJ3 306 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 MYD88Q99836 296 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 CEP126Q9P2H0 1117 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 NSFL1CQ9UNZ2 370 aaKnown RBP11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 CEP350Q5VT06 3117 aa11.3□□□□□ -0.6
TNRC6B-208ENST00000489500 MYH3P11055 1940 aa11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 SNED1Q8TER0 1413 aa11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 H7C1D1 291 aa11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 APBB1O00213 710 aa11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 POU4F2Q12837 409 aa11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 CYP2U1Q7Z449 544 aa11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 IL16Q14005 1332 aa11.29□□□□□ -0.6
TNRC6B-208ENST00000489500 PDE8AO60658 829 aa11.28□□□□□ -0.6
TNRC6B-208ENST00000489500 PCCAP05165 728 aaPredicted RBP11.28□□□□□ -0.6
TNRC6B-208ENST00000489500 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
TNRC6B-208ENST00000489500 CLN3Q13286 438 aa11.28□□□□□ -0.6
TNRC6B-208ENST00000489500 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
TNRC6B-208ENST00000489500 ZNF592Q92610 1267 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms