RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
SNX17-207ENST00000489402 ABCF2Q9UG63 623 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 SRRDQ9UH36 339 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 AKAP2Q9Y2D5 859 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
SNX17-207ENST00000489402 DOCK1Q14185 1865 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 ZBTB22O15209 634 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 OSBPP22059 807 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 GRK4P32298 578 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 MVPQ14764 893 aaKnown RBP11.6□□□□□ -0.55
SNX17-207ENST00000489402 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 FASTKD5Q7L8L6 764 aaKnown RBP11.6□□□□□ -0.55
SNX17-207ENST00000489402 SCYL3Q8IZE3 742 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 TRIM47Q96LD4 638 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 GAKO14976 1311 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 ADGRA2Q96PE1 1338 aa11.6□□□□□ -0.55
SNX17-207ENST00000489402 MGAMO43451 1857 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 ATRNL1Q5VV63 1379 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 GNAI3P08754 354 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 FCGRTP55899 365 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 TIMM10P62072 90 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 RASGRF1Q13972 1273 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 ZNF384Q8TF68 577 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 BIN2Q9UBW5 565 aaPredicted RBP11.59□□□□□ -0.55
SNX17-207ENST00000489402 ZHX2Q9Y6X8 837 aa11.59□□□□□ -0.55
SNX17-207ENST00000489402 RFX7Q2KHR2 1363 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 A0A0G2JLL6 359 aaPredicted RBP11.58□□□□□ -0.56
SNX17-207ENST00000489402 A0A1B0GUL7 405 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 SRGAP3O43295 1099 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 CYP2C8P10632 490 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 PTPRAP18433 802 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 BTDP43251 543 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 UBXN2AP68543 259 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 PICALMQ13492 652 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 MTFR1Q15390 333 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 ERICH6Q7L0X2 663 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 PRRT2Q7Z6L0 340 aaPredicted RBP11.58□□□□□ -0.56
SNX17-207ENST00000489402 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
SNX17-207ENST00000489402 FAM163AQ96GL9 167 aaPredicted RBP11.58□□□□□ -0.56
SNX17-207ENST00000489402 PTPRFP10586 1907 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 MROH7-TTC4A0A0A0MT08 1334 aa11.58□□□□□ -0.56
SNX17-207ENST00000489402 RANBP2P49792 3224 aaKnown RBP11.57□□□□□ -0.56
SNX17-207ENST00000489402 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 CTNND1O60716 968 aaKnown RBP11.57□□□□□ -0.56
SNX17-207ENST00000489402 BCRP11274 1271 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 TFCP2Q12800 502 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 GORABQ5T7V8 394 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 SMCR8Q8TEV9 937 aaPredicted RBP11.57□□□□□ -0.56
SNX17-207ENST00000489402 ARHGAP45Q92619 1136 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 XAGE2Q96GT9 111 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 NEUROD6Q96NK8 337 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 DDX4Q9NQI0 724 aaKnown RBP11.57□□□□□ -0.56
SNX17-207ENST00000489402 SLC45A1Q9Y2W3 748 aa11.57□□□□□ -0.56
SNX17-207ENST00000489402 PHIPQ8WWQ0 1821 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 DDTLA6NHG4 134 aaPredicted RBP11.56□□□□□ -0.56
SNX17-207ENST00000489402 IPO8O15397 1037 aaKnown RBP11.56□□□□□ -0.56
SNX17-207ENST00000489402 LDHCP07864 332 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 CCL5P13501 91 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
SNX17-207ENST00000489402 GSTO1P78417 241 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
SNX17-207ENST00000489402 MAP3K10Q02779 954 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 MECOMQ03112 1051 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 PRKCZQ05513 592 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
SNX17-207ENST00000489402 MTX1Q13505 466 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 RNF208Q9H0X6 261 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 AFG3L2Q9Y4W6 797 aa11.56□□□□□ -0.56
SNX17-207ENST00000489402 GPR75-ASB3A0A0A6YYF3 556 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 TRIM75PA6NK02 468 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 FAM196BA6NMK8 535 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 BCAR3O75815 825 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 MAP4K4O95819 1239 aaPredicted RBP11.55□□□□□ -0.56
SNX17-207ENST00000489402 GJB1P08034 283 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 GJA8P48165 433 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 RRP1BQ14684 758 aaKnown RBP11.55□□□□□ -0.56
SNX17-207ENST00000489402 TBC1D9Q6ZT07 1266 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 DPF3Q92784 378 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 SHISA4Q96DD7 197 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 HTATIP2Q9BUP3 242 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNX17-207ENST00000489402 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
SNX17-207ENST00000489402 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
SNX17-207ENST00000489402 ATAD5Q96QE3 1844 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 H0YGN5 161 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 TNPO2O14787 897 aaKnown RBP11.54□□□□□ -0.56
SNX17-207ENST00000489402 ADCY3O60266 1144 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 TBC1D12O60347 775 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 FXR1P51114 621 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNX17-207ENST00000489402 G3BP1Q13283 466 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNX17-207ENST00000489402 SPATA5Q8NB90 893 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
SNX17-207ENST00000489402 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 OSBPL5Q9H0X9 879 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms