RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CRISPLD2Q9H0B8 497 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 MAP3K2Q9Y2U5 619 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 PRUNE2Q8WUY3 3088 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 ELL2O00472 640 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-212ENST00000489378 FCGRTP55899 365 aa11.81□□□□□ -0.52
SSBP1-212ENST00000489378 FOXK1P85037 733 aa11.81□□□□□ -0.52
SSBP1-212ENST00000489378 ANKRD23Q86SG2 305 aa11.81□□□□□ -0.52
SSBP1-212ENST00000489378 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
SSBP1-212ENST00000489378 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-212ENST00000489378 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
SSBP1-212ENST00000489378 LAMA2P24043 3122 aaKnown RBP11.81□□□□□ -0.52
SSBP1-212ENST00000489378 A0A1B0GUL6 1792 aa11.81□□□□□ -0.52
SSBP1-212ENST00000489378 BCRP11274 1271 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 CACNB3P54284 484 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 MOGSQ13724 837 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 CWF19L2Q2TBE0 894 aaKnown RBP11.8□□□□□ -0.52
SSBP1-212ENST00000489378 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 ZNF804AQ7Z570 1209 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 NECAB2Q7Z6G3 386 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 CCDC146Q8IYE0 955 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-212ENST00000489378 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 SERPINA10Q9UK55 444 aa11.8□□□□□ -0.52
SSBP1-212ENST00000489378 H7C1W4 665 aa11.79□□□□□ -0.52
SSBP1-212ENST00000489378 TNNI2P48788 182 aa11.79□□□□□ -0.52
SSBP1-212ENST00000489378 FLT3LGP49771 235 aa11.79□□□□□ -0.52
SSBP1-212ENST00000489378 MFSD14BQ5SR56 506 aa11.79□□□□□ -0.52
SSBP1-212ENST00000489378 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
SSBP1-212ENST00000489378 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
SSBP1-212ENST00000489378 FAM205AQ6ZU69 1335 aa11.79□□□□□ -0.52
SSBP1-212ENST00000489378 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
SSBP1-212ENST00000489378 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
SSBP1-212ENST00000489378 CYP2C8P10632 490 aa11.78□□□□□ -0.52
SSBP1-212ENST00000489378 CRKP46108 304 aa11.78□□□□□ -0.52
SSBP1-212ENST00000489378 PPATQ06203 517 aa11.78□□□□□ -0.52
SSBP1-212ENST00000489378 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
SSBP1-212ENST00000489378 FAM161BQ96MY7 647 aa11.78□□□□□ -0.52
SSBP1-212ENST00000489378 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 CSF1RP07333 972 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 INPP5BP32019 993 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 PBX2P40425 430 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 GRIK5Q16478 980 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 KSR2Q6VAB6 950 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 PLPP6Q8IY26 295 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 PLA2G12BQ9BX93 195 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 KCNH4Q9UQ05 1017 aa11.77□□□□□ -0.52
SSBP1-212ENST00000489378 MUC3AQ02505 3323 aa11.77□□□□□ -0.53
SSBP1-212ENST00000489378 CAPN2P17655 700 aa11.77□□□□□ -0.53
SSBP1-212ENST00000489378 COL9A1P20849 921 aa11.77□□□□□ -0.53
SSBP1-212ENST00000489378 GPAT2Q6NUI2 795 aa11.77□□□□□ -0.53
SSBP1-212ENST00000489378 MIGA2Q7L4E1 593 aa11.77□□□□□ -0.53
SSBP1-212ENST00000489378 PARK7Q99497 189 aaKnown RBP11.77□□□□□ -0.53
SSBP1-212ENST00000489378 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.77□□□□□ -0.53
SSBP1-212ENST00000489378 RAPGEFL1Q9UHV5 662 aa11.77□□□□□ -0.53
SSBP1-212ENST00000489378 DDX60LQ5H9U9 1706 aaKnown RBP11.76□□□□□ -0.53
SSBP1-212ENST00000489378 CASP7P55210 303 aa11.76□□□□□ -0.53
SSBP1-212ENST00000489378 IRF5Q13568 498 aa11.76□□□□□ -0.53
SSBP1-212ENST00000489378 DSG2Q14126 1118 aa11.76□□□□□ -0.53
SSBP1-212ENST00000489378 FAM109BQ6ICB4 259 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-212ENST00000489378 TDRD7Q8NHU6 1098 aaKnown RBP11.76□□□□□ -0.53
SSBP1-212ENST00000489378 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-212ENST00000489378 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
SSBP1-212ENST00000489378 TNPO2O14787 897 aaKnown RBP11.75□□□□□ -0.53
SSBP1-212ENST00000489378 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
SSBP1-212ENST00000489378 NEXNQ0ZGT2 675 aa11.75□□□□□ -0.53
SSBP1-212ENST00000489378 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
SSBP1-212ENST00000489378 ZNF341Q9BYN7 854 aa11.75□□□□□ -0.53
SSBP1-212ENST00000489378 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
SSBP1-212ENST00000489378 PLIN1O60240 522 aa11.74□□□□□ -0.53
SSBP1-212ENST00000489378 GYG1P46976 350 aa11.74□□□□□ -0.53
SSBP1-212ENST00000489378 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
SSBP1-212ENST00000489378 ANKLE1Q8NAG6 615 aa11.74□□□□□ -0.53
SSBP1-212ENST00000489378 C11orf49Q9H6J7 331 aa11.74□□□□□ -0.53
SSBP1-212ENST00000489378 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-212ENST00000489378 CDH23Q9H251 3354 aa11.73□□□□□ -0.53
SSBP1-212ENST00000489378 GCKRQ14397 625 aa11.73□□□□□ -0.53
SSBP1-212ENST00000489378 FAM83AQ86UY5 434 aa11.73□□□□□ -0.53
SSBP1-212ENST00000489378 MAFAQ8NHW3 353 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-212ENST00000489378 HOOK2Q96ED9 719 aa11.73□□□□□ -0.53
SSBP1-212ENST00000489378 MDM2Q00987 491 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-212ENST00000489378 TRIM32Q13049 653 aa11.72□□□□□ -0.53
SSBP1-212ENST00000489378 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
SSBP1-212ENST00000489378 RUNDC1Q96C34 613 aa11.72□□□□□ -0.53
SSBP1-212ENST00000489378 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-212ENST00000489378 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
SSBP1-212ENST00000489378 PFASO15067 1338 aa11.72□□□□□ -0.53
SSBP1-212ENST00000489378 RPAP1Q9BWH6 1393 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-212ENST00000489378 HIBADHP31937 336 aaKnown RBP11.71□□□□□ -0.53
SSBP1-212ENST00000489378 IFIT5Q13325 482 aaKnown RBP11.71□□□□□ -0.53
SSBP1-212ENST00000489378 FKBP1CQ5VVH2 108 aa11.71□□□□□ -0.53
SSBP1-212ENST00000489378 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
SSBP1-212ENST00000489378 G2E3Q7L622 706 aa11.71□□□□□ -0.53
SSBP1-212ENST00000489378 TEKT1Q969V4 418 aa11.71□□□□□ -0.53
SSBP1-212ENST00000489378 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-212ENST00000489378 FAM84BQ96KN1 310 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-212ENST00000489378 TMOD2Q9NZR1 351 aa11.71□□□□□ -0.53
SSBP1-212ENST00000489378 CXCL11O14625 94 aa11.7□□□□□ -0.54
SSBP1-212ENST00000489378 FOXO4P98177 505 aa11.7□□□□□ -0.54
SSBP1-212ENST00000489378 HDLBPQ00341 1268 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms