RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 TEPSINQ96N21 525 aa11.72□□□□□ -0.53
FDPS-214ENST00000489324 NACAP1Q9BZK3 213 aa11.72□□□□□ -0.53
FDPS-214ENST00000489324 ARMT1Q9H993 441 aa11.72□□□□□ -0.53
FDPS-214ENST00000489324 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
FDPS-214ENST00000489324 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
FDPS-214ENST00000489324 TBC1D12O60347 775 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 CELF2O95319 508 aaKnown RBP11.71□□□□□ -0.53
FDPS-214ENST00000489324 HLA-DOAP06340 250 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 APLP1P51693 650 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 TCP10Q12799 353 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 MAP3K11Q16584 847 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 TTC6Q86TZ1 520 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 FOXP4Q8IVH2 680 aaPredicted RBP11.71□□□□□ -0.53
FDPS-214ENST00000489324 AMOTL1Q8IY63 956 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 C2orf69Q8N8R5 385 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 TMEM39BQ9GZU3 492 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.53
FDPS-214ENST00000489324 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
FDPS-214ENST00000489324 SLC4A4Q9Y6R1 1079 aa11.71□□□□□ -0.53
FDPS-214ENST00000489324 M0R2C6 588 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 TRAF5O00463 557 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 CHMLP26374 656 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 MAP3K10Q02779 954 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 NMIQ13287 307 aaPredicted RBP11.7□□□□□ -0.54
FDPS-214ENST00000489324 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
FDPS-214ENST00000489324 MAPKAPK5Q8IW41 473 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 ZSCAN29Q8IWY8 852 aaPredicted RBP11.7□□□□□ -0.54
FDPS-214ENST00000489324 CSRNP1Q96S65 589 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 GBA2Q9HCG7 927 aaPredicted RBP11.7□□□□□ -0.54
FDPS-214ENST00000489324 DCP1AQ9NPI6 582 aaPredicted RBP11.7□□□□□ -0.54
FDPS-214ENST00000489324 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 HERC5Q9UII4 1024 aaKnown RBP11.7□□□□□ -0.54
FDPS-214ENST00000489324 ECM29Q5VYK3 1845 aa11.7□□□□□ -0.54
FDPS-214ENST00000489324 CCDC171Q6TFL3 1326 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 EIF5BO60841 1220 aaKnown RBP11.69□□□□□ -0.54
FDPS-214ENST00000489324 CHGBP05060 677 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
FDPS-214ENST00000489324 ALX1Q15699 326 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 SLFNL1Q499Z3 407 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 SBK1Q52WX2 424 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 CST9Q5W186 159 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 CWC27Q6UX04 472 aaKnown RBP11.69□□□□□ -0.54
FDPS-214ENST00000489324 METTL16Q86W50 562 aaKnown RBP11.69□□□□□ -0.54
FDPS-214ENST00000489324 HHIPL1Q96JK4 782 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 ZNF341Q9BYN7 854 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 EHD4Q9H223 541 aa11.69□□□□□ -0.54
FDPS-214ENST00000489324 ARPP21Q9UBL0 812 aaPredicted RBP11.69□□□□□ -0.54
FDPS-214ENST00000489324 ZMYM6O95789 1325 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 DDTLA6NHG4 134 aaPredicted RBP11.68□□□□□ -0.54
FDPS-214ENST00000489324 GSG1L2A8MUP6 293 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 CDC45O75419 566 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
FDPS-214ENST00000489324 HSPA6P17066 643 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 SH3BP5LQ7L8J4 393 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 IFNL3Q8IZI9 196 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
FDPS-214ENST00000489324 TRIM34Q9BYJ4 488 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 ZNF408Q9H9D4 720 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 MCM9Q9NXL9 1143 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 SCAF8Q9UPN6 1271 aaKnown RBP11.68□□□□□ -0.54
FDPS-214ENST00000489324 TLL2Q9Y6L7 1015 aa11.68□□□□□ -0.54
FDPS-214ENST00000489324 PRKAB2O43741 272 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 APPP05067 770 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 TDO2P48775 406 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 NT5C2P49902 561 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
FDPS-214ENST00000489324 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 DSCC1Q9BVC3 393 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 ZNF287Q9HBT7 754 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 SWAP70Q9UH65 585 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
FDPS-214ENST00000489324 ANGEL1Q9UNK9 670 aaKnown RBP11.67□□□□□ -0.54
FDPS-214ENST00000489324 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
FDPS-214ENST00000489324 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 USP17L21D6R901 530 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 SGSM2O43147 1006 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 USP2O75604 605 aaPredicted RBP11.66□□□□□ -0.54
FDPS-214ENST00000489324 SLC3A2P08195 630 aaKnown RBP11.66□□□□□ -0.54
FDPS-214ENST00000489324 HSPD1P10809 573 aaKnown RBP11.66□□□□□ -0.54
FDPS-214ENST00000489324 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 LDLRAD1Q5T700 205 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 SAPCD2Q86UD0 394 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 ANKRD13AQ8IZ07 590 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 CRACR2BQ8N4Y2 399 aaPredicted RBP11.66□□□□□ -0.54
FDPS-214ENST00000489324 KLRG1Q96E93 195 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 NAPBQ9H115 298 aa11.66□□□□□ -0.54
FDPS-214ENST00000489324 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.66□□□□□ -0.54
FDPS-214ENST00000489324 CTNNA3Q9UI47 895 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms