RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
LMO4-203ENST00000489303 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
LMO4-203ENST00000489303 TCP10Q12799 353 aa16.5■□□□□ 0.23
LMO4-203ENST00000489303 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
LMO4-203ENST00000489303 NSUN4Q96CB9 384 aaKnown RBP16.5■□□□□ 0.23
LMO4-203ENST00000489303 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
LMO4-203ENST00000489303 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
LMO4-203ENST00000489303 ENTPD3O75355 529 aa16.49■□□□□ 0.23
LMO4-203ENST00000489303 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
LMO4-203ENST00000489303 NFIAQ12857 509 aa16.49■□□□□ 0.23
LMO4-203ENST00000489303 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
LMO4-203ENST00000489303 ZKSCAN4Q969J2 545 aaPredicted RBP16.49■□□□□ 0.23
LMO4-203ENST00000489303 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
LMO4-203ENST00000489303 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
LMO4-203ENST00000489303 ZNF341Q9BYN7 854 aa16.49■□□□□ 0.23
LMO4-203ENST00000489303 TLR7Q9NYK1 1049 aaKnown RBP16.49■□□□□ 0.23
LMO4-203ENST00000489303 ZSWIM8A7E2V4 1837 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 SLC34A2O95436 690 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 BAG3O95817 575 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 ZAP70P43403 619 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
LMO4-203ENST00000489303 NAA16Q6N069 864 aaPredicted RBP16.48■□□□□ 0.23
LMO4-203ENST00000489303 MIGA2Q7L4E1 593 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 ZSCAN29Q8IWY8 852 aaPredicted RBP16.48■□□□□ 0.23
LMO4-203ENST00000489303 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
LMO4-203ENST00000489303 CENPFP49454 3210 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 POTEFA5A3E0 1075 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 CYP2E1P05181 493 aaPredicted RBP16.47■□□□□ 0.23
LMO4-203ENST00000489303 RGS3P49796 1198 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 PICALMQ13492 652 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 CCL15Q16663 113 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 WRNIP1Q96S55 665 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 FAM198AQ9UFP1 575 aa16.47■□□□□ 0.23
LMO4-203ENST00000489303 PLCG2P16885 1265 aa16.46■□□□□ 0.23
LMO4-203ENST00000489303 OTUD7BQ6GQQ9 843 aa16.46■□□□□ 0.23
LMO4-203ENST00000489303 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.23
LMO4-203ENST00000489303 PDE4DIPQ5VU43 2346 aa16.45■□□□□ 0.22
LMO4-203ENST00000489303 IDH1O75874 414 aaKnown RBP16.45■□□□□ 0.22
LMO4-203ENST00000489303 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
LMO4-203ENST00000489303 SLURP2P0DP57 97 aa16.45■□□□□ 0.22
LMO4-203ENST00000489303 INPP5BP32019 993 aa16.45■□□□□ 0.22
LMO4-203ENST00000489303 TTF1Q15361 905 aaPredicted RBP16.45■□□□□ 0.22
LMO4-203ENST00000489303 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
LMO4-203ENST00000489303 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
LMO4-203ENST00000489303 SPDYE5A6NIY4 337 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 IRF6O14896 467 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
LMO4-203ENST00000489303 WDHD1O75717 1129 aaPredicted RBP16.44■□□□□ 0.22
LMO4-203ENST00000489303 RHBDL3P58872 404 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 SP3Q02447 781 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 MAP3K12Q12852 859 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 TMED8Q6PL24 325 aaPredicted RBP16.44■□□□□ 0.22
LMO4-203ENST00000489303 TEX11Q8IYF3 940 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
LMO4-203ENST00000489303 BRCA2P51587 3418 aa16.44■□□□□ 0.22
LMO4-203ENST00000489303 GTF2A2P52657 109 aa16.43■□□□□ 0.22
LMO4-203ENST00000489303 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
LMO4-203ENST00000489303 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
LMO4-203ENST00000489303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.43■□□□□ 0.22
LMO4-203ENST00000489303 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
LMO4-203ENST00000489303 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
LMO4-203ENST00000489303 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
LMO4-203ENST00000489303 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
LMO4-203ENST00000489303 BTBD19C9JJ37 291 aa16.42■□□□□ 0.22
LMO4-203ENST00000489303 CYP7A1P22680 504 aa16.42■□□□□ 0.22
LMO4-203ENST00000489303 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
LMO4-203ENST00000489303 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
LMO4-203ENST00000489303 MYH2Q9UKX2 1941 aa16.42■□□□□ 0.22
LMO4-203ENST00000489303 MKI67P46013 3256 aaKnown RBP16.42■□□□□ 0.22
LMO4-203ENST00000489303 RFX7Q2KHR2 1363 aa16.41■□□□□ 0.22
LMO4-203ENST00000489303 PPP4CP60510 307 aa16.41■□□□□ 0.22
LMO4-203ENST00000489303 PPATQ06203 517 aa16.41■□□□□ 0.22
LMO4-203ENST00000489303 SH3RF3Q8TEJ3 882 aaPredicted RBP16.41■□□□□ 0.22
LMO4-203ENST00000489303 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
LMO4-203ENST00000489303 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
LMO4-203ENST00000489303 ZNF112Q9UJU3 913 aa16.41■□□□□ 0.22
LMO4-203ENST00000489303 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
LMO4-203ENST00000489303 EN2P19622 333 aaPredicted RBP16.4■□□□□ 0.22
LMO4-203ENST00000489303 MAGEB6Q8N7X4 407 aa16.4■□□□□ 0.22
LMO4-203ENST00000489303 OSBPL5Q9H0X9 879 aaPredicted RBP16.4■□□□□ 0.22
LMO4-203ENST00000489303 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
LMO4-203ENST00000489303 ZFYVE28Q9HCC9 887 aa16.4■□□□□ 0.22
LMO4-203ENST00000489303 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
LMO4-203ENST00000489303 NDUFB9Q9Y6M9 179 aa16.4■□□□□ 0.22
LMO4-203ENST00000489303 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
LMO4-203ENST00000489303 CETPP11597 493 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 CTGFP29279 349 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 PPIL2Q13356 520 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 SNAPC2Q13487 334 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 NOL9Q5SY16 702 aaKnown RBP16.39■□□□□ 0.21
LMO4-203ENST00000489303 SH3BP5LQ7L8J4 393 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 DHX36Q9H2U1 1008 aaKnown RBP16.39■□□□□ 0.21
LMO4-203ENST00000489303 PICK1Q9NRD5 415 aa16.39■□□□□ 0.21
LMO4-203ENST00000489303 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms