RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-213	ENST00000489215	MIGA2	Q7L4E1	593 aa		29.25	■■■□□ 2.27
PTPN18-213	ENST00000489215	ERO1B	Q86YB8	467 aa		29.25	■■■□□ 2.27
PTPN18-213	ENST00000489215	RFX7	Q2KHR2	1363 aa		29.25	■■■□□ 2.27
PTPN18-213	ENST00000489215	PPP4C	P60510	307 aa		29.24	■■■□□ 2.27
PTPN18-213	ENST00000489215	CFHR5	Q9BXR6	569 aa		29.24	■■■□□ 2.27
PTPN18-213	ENST00000489215	ZNF112	Q9UJU3	913 aa		29.24	■■■□□ 2.27
PTPN18-213	ENST00000489215	GTF2A2	P52657	109 aa		29.23	■■■□□ 2.27
PTPN18-213	ENST00000489215	PICALM	Q13492	652 aa		29.23	■■■□□ 2.27
PTPN18-213	ENST00000489215	NOM1	Q5C9Z4	860 aa	Known RBP	29.23	■■■□□ 2.27
PTPN18-213	ENST00000489215	SPDYE5	A6NIY4	337 aa		29.22	■■■□□ 2.27
PTPN18-213	ENST00000489215	IDH1	O75874	414 aa	Known RBP	29.22	■■■□□ 2.27
PTPN18-213	ENST00000489215	IFNL1	Q8IU54	200 aa		29.22	■■■□□ 2.27
PTPN18-213	ENST00000489215	ZFPM1	Q8IX07	1006 aa		29.22	■■■□□ 2.27
PTPN18-213	ENST00000489215	TEX11	Q8IYF3	940 aa		29.22	■■■□□ 2.27
PTPN18-213	ENST00000489215	DCTPP1	Q9H773	170 aa		29.22	■■■□□ 2.27
PTPN18-213	ENST00000489215	PIH1D3	Q9NQM4	214 aa	Known RBP	29.22	■■■□□ 2.27
PTPN18-213	ENST00000489215	TESPA1	A2RU30	521 aa	Predicted RBP	29.21	■■■□□ 2.27
PTPN18-213	ENST00000489215	AAMP	Q13685	434 aa		29.21	■■■□□ 2.27
PTPN18-213	ENST00000489215	DOCK2	Q92608	1830 aa		29.2	■■■□□ 2.27
PTPN18-213	ENST00000489215	MAP3K10	Q02779	954 aa		29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	ZKSCAN4	Q969J2	545 aa	Predicted RBP	29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	DDX4	Q9NQI0	724 aa	Known RBP	29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	AATF	Q9NY61	560 aa	Known RBP eCLIP	29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	SNCAIP	Q9Y6H5	919 aa		29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	ATRNL1	Q5VV63	1379 aa		29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	COL2A1	P02458	1487 aa	Predicted RBP	29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	CASP8AP2	Q9UKL3	1982 aa		29.2	■■■□□ 2.26
PTPN18-213	ENST00000489215	TBC1D12	O60347	775 aa		29.19	■■■□□ 2.26
PTPN18-213	ENST00000489215	CYP7A1	P22680	504 aa		29.19	■■■□□ 2.26
PTPN18-213	ENST00000489215	GJA5	P36382	358 aa		29.19	■■■□□ 2.26
PTPN18-213	ENST00000489215	PPAT	Q06203	517 aa		29.19	■■■□□ 2.26
PTPN18-213	ENST00000489215	OTUD5	Q96G74	571 aa		29.19	■■■□□ 2.26
PTPN18-213	ENST00000489215	DHX36	Q9H2U1	1008 aa	Known RBP	29.19	■■■□□ 2.26
PTPN18-213	ENST00000489215	MYO5A	Q9Y4I1	1855 aa	Known RBP	29.19	■■■□□ 2.26
PTPN18-213	ENST00000489215	ATP5J	P18859	108 aa		29.18	■■■□□ 2.26
PTPN18-213	ENST00000489215	NOL9	Q5SY16	702 aa	Known RBP	29.18	■■■□□ 2.26
PTPN18-213	ENST00000489215	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.18	■■■□□ 2.26
PTPN18-213	ENST00000489215	DDTL	A6NHG4	134 aa	Predicted RBP	29.17	■■■□□ 2.26
PTPN18-213	ENST00000489215	PPIL2	Q13356	520 aa		29.17	■■■□□ 2.26
PTPN18-213	ENST00000489215	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	29.17	■■■□□ 2.26
PTPN18-213	ENST00000489215	BCL11A	Q9H165	835 aa		29.17	■■■□□ 2.26
PTPN18-213	ENST00000489215	TBC1D8	O95759	1140 aa		29.16	■■■□□ 2.26
PTPN18-213	ENST00000489215	CETP	P11597	493 aa		29.16	■■■□□ 2.26
PTPN18-213	ENST00000489215	INPP5B	P32019	993 aa		29.16	■■■□□ 2.26
PTPN18-213	ENST00000489215	SH3BP5L	Q7L8J4	393 aa		29.16	■■■□□ 2.26
PTPN18-213	ENST00000489215	MAGEB6	Q8N7X4	407 aa		29.16	■■■□□ 2.26
PTPN18-213	ENST00000489215	MS4A4A	Q96JQ5	239 aa		29.16	■■■□□ 2.26
PTPN18-213	ENST00000489215	ANTXR1	Q9H6X2	564 aa		29.16	■■■□□ 2.26
PTPN18-213	ENST00000489215	SNAPC2	Q13487	334 aa		29.15	■■■□□ 2.26
PTPN18-213	ENST00000489215	CTNND1	O60716	968 aa	Known RBP	29.14	■■■□□ 2.26
PTPN18-213	ENST00000489215	GPATCH3	Q96I76	525 aa		29.14	■■■□□ 2.26
PTPN18-213	ENST00000489215	DNAJC2	Q99543	621 aa	Known RBP	29.14	■■■□□ 2.26
PTPN18-213	ENST00000489215	PICK1	Q9NRD5	415 aa		29.14	■■■□□ 2.26
PTPN18-213	ENST00000489215	PI4KB	Q9UBF8	816 aa		29.14	■■■□□ 2.26
PTPN18-213	ENST00000489215	HERC5	Q9UII4	1024 aa	Known RBP	29.14	■■■□□ 2.26
PTPN18-213	ENST00000489215	CCL15-CCL14	A0A0B4J2E2	113 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	PHF20L1	A8MW92	1017 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	GPR25	O00155	361 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	IGF2BP3	O00425	579 aa	Known RBP eCLIP	29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	CCL15	Q16663	113 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	ADGRA1	Q86SQ6	560 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	SCYL3	Q8IZE3	742 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	CNKSR2	Q8WXI2	1034 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	ZCCHC17	Q9NP64	241 aa	Known RBP	29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	PCDHB15	Q9Y5E8	787 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	NDUFB9	Q9Y6M9	179 aa		29.13	■■■□□ 2.25
PTPN18-213	ENST00000489215	IRF6	O14896	467 aa		29.12	■■■□□ 2.25
PTPN18-213	ENST00000489215	TGFBRAP1	Q8WUH2	860 aa		29.12	■■■□□ 2.25
PTPN18-213	ENST00000489215	CRBN	Q96SW2	442 aa		29.12	■■■□□ 2.25
PTPN18-213	ENST00000489215	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	29.12	■■■□□ 2.25	8e-7	■■■■■ 37.5
PTPN18-213	ENST00000489215	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	29.12	■■■□□ 2.25
PTPN18-213	ENST00000489215	PAG1	Q9NWQ8	432 aa		29.12	■■■□□ 2.25
PTPN18-213	ENST00000489215	GOLIM4	O00461	696 aa		29.11	■■■□□ 2.25
PTPN18-213	ENST00000489215	SLC9C2	Q5TAH2	1124 aa		29.11	■■■□□ 2.25
PTPN18-213	ENST00000489215	HAUS7	Q99871	368 aa		29.11	■■■□□ 2.25
PTPN18-213	ENST00000489215	BOLA2	Q9H3K6	86 aa		29.11	■■■□□ 2.25
PTPN18-213	ENST00000489215	FOXP4	Q8IVH2	680 aa	Predicted RBP	29.1	■■■□□ 2.25
PTPN18-213	ENST00000489215	PTPN18	Q99952	460 aa		29.1	■■■□□ 2.25
PTPN18-213	ENST00000489215	ECHDC1	Q9NTX5	307 aa		29.1	■■■□□ 2.25
PTPN18-213	ENST00000489215	ZBTB47	Q9UFB7	747 aa	Predicted RBP	29.1	■■■□□ 2.25
PTPN18-213	ENST00000489215	FOCAD	Q5VW36	1801 aa		29.1	■■■□□ 2.25
PTPN18-213	ENST00000489215	SMARCA5	O60264	1052 aa	Predicted RBP	29.09	■■■□□ 2.25
PTPN18-213	ENST00000489215	FKTN	O75072	461 aa		29.09	■■■□□ 2.25
PTPN18-213	ENST00000489215	DGKZ	Q13574	1117 aa		29.09	■■■□□ 2.25
PTPN18-213	ENST00000489215	ZNF296	Q8WUU4	475 aa	Predicted RBP	29.09	■■■□□ 2.25
PTPN18-213	ENST00000489215	BRI3BP	Q8WY22	251 aa		29.09	■■■□□ 2.25
PTPN18-213	ENST00000489215	KCNH4	Q9UQ05	1017 aa		29.09	■■■□□ 2.25
PTPN18-213	ENST00000489215	FLT1	P17948	1338 aa		29.09	■■■□□ 2.25
PTPN18-213	ENST00000489215	CXCL11	O14625	94 aa		29.08	■■■□□ 2.25
PTPN18-213	ENST00000489215	HLA-DOA	P06340	250 aa		29.08	■■■□□ 2.25
PTPN18-213	ENST00000489215	USP5	P45974	858 aa		29.08	■■■□□ 2.25
PTPN18-213	ENST00000489215	MAPKAPK5	Q8IW41	473 aa		29.08	■■■□□ 2.25
PTPN18-213	ENST00000489215	ZFYVE28	Q9HCC9	887 aa		29.08	■■■□□ 2.25
PTPN18-213	ENST00000489215	MAGEB6P1	A0A0J9YX57	407 aa		29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	PDE6A	P16499	860 aa		29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	DYNLL1	P63167	89 aa	Known RBP	29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	PKN2	Q16513	984 aa	Known RBP	29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	ZSCAN25	Q6NSZ9	544 aa		29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	CTU1	Q7Z7A3	348 aa	Known RBP	29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	MIGA1	Q8NAN2	632 aa		29.07	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms