RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 BMP6P22004 513 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 RSRC2Q7L4I2 434 aaKnown RBP12.61□□□□□ -0.39
NEB-215ENST00000489048 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
NEB-215ENST00000489048 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 CARD6Q9BX69 1037 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.61□□□□□ -0.39
NEB-215ENST00000489048 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
NEB-215ENST00000489048 MRFAP1Q9Y605 127 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 SARSP49591 514 aaKnown RBP12.6□□□□□ -0.39
NEB-215ENST00000489048 PDE4BQ07343 736 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 UBE3CQ15386 1083 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 ENOX1Q8TC92 643 aaKnown RBP12.6□□□□□ -0.39
NEB-215ENST00000489048 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 BAG1Q99933 345 aaPredicted RBP12.6□□□□□ -0.39
NEB-215ENST00000489048 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 FAM217BQ9NTX9 383 aaPredicted RBP12.6□□□□□ -0.39
NEB-215ENST00000489048 TIAM2Q8IVF5 1701 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
NEB-215ENST00000489048 A1BGP04217 495 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 PCCAP05165 728 aaPredicted RBP12.6□□□□□ -0.39
NEB-215ENST00000489048 TCIRG1Q13488 830 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 ALX1Q15699 326 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
NEB-215ENST00000489048 TC2NQ8N9U0 490 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 TRIML1Q8N9V2 468 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 DACH1Q9UI36 760 aa12.6□□□□□ -0.39
NEB-215ENST00000489048 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 PCDH11XQ9BZA7 1347 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 PCDH11YQ9BZA8 1340 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 CASQ1P31415 396 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 MCAMP43121 646 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 TTF1Q15361 905 aaPredicted RBP12.59□□□□□ -0.39
NEB-215ENST00000489048 MLKLQ8NB16 471 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 LY9Q9HBG7 655 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 MAN1B1Q9UKM7 699 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 ZBTB43O43298 467 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
NEB-215ENST00000489048 LIFRP42702 1097 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 TRIM29Q14134 588 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
NEB-215ENST00000489048 HSP90AB3PQ58FF7 597 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 SPECC1LQ69YQ0 1117 aa12.59□□□□□ -0.39
NEB-215ENST00000489048 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
NEB-215ENST00000489048 TNS3Q68CZ2 1445 aa12.58□□□□□ -0.39
NEB-215ENST00000489048 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
NEB-215ENST00000489048 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 GNL2Q13823 731 aaKnown RBP12.58□□□□□ -0.4
NEB-215ENST00000489048 MORC3Q14149 939 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 CT47A1Q5JQC4 288 aaPredicted RBP12.58□□□□□ -0.4
NEB-215ENST00000489048 TEX35Q5T0J7 233 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 STK11IPQ8N1F8 1099 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
NEB-215ENST00000489048 WASF1Q92558 559 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 RIPOR2Q9Y4F9 1068 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 PTPREP23469 700 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 PPP2R3AQ06190 1150 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 GOLGA8FQ08AF8 430 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 GOLGA8DPQ0D2H9 430 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 POSTNQ15063 836 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 NOSTRINQ8IVI9 506 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 RABGGTAQ92696 567 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 PHKBQ93100 1093 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 DCCP43146 1447 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 CDHR2Q9BYE9 1310 aa12.58□□□□□ -0.4
NEB-215ENST00000489048 GOLGA8AA7E2F4 631 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 PI16Q6UXB8 463 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 WDR24Q96S15 920 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
NEB-215ENST00000489048 TULP2O00295 520 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 IFNAR1P17181 557 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 IFIT5Q13325 482 aaKnown RBP12.57□□□□□ -0.4
NEB-215ENST00000489048 JAKMIP3Q5VZ66 844 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
NEB-215ENST00000489048 SENP2Q9HC62 589 aa12.57□□□□□ -0.4
NEB-215ENST00000489048 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 SASH3O75995 380 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 MMP1P03956 469 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 GNG11P61952 73 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEB-215ENST00000489048 SSRP1Q08945 709 aaKnown RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 NR1I3Q14994 352 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 NUTM2AQ8IVF1 878 aaPredicted RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 VGLL2Q8N8G2 317 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 PANX2Q96RD6 677 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 RAI14Q9P0K7 980 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 NFE2L3Q9Y4A8 694 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 WDR17Q8IZU2 1322 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 A0A1B0GTH6 734 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 B4E1Z4 1266 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 FOXN1O15353 648 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms