RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 DAGLAQ9Y4D2 1042 aa4.58□□□□□ -1.68
CALD1-221ENST00000489019 FAM170BA6NMN3 283 aa4.57□□□□□ -1.68
CALD1-221ENST00000489019 KIAA1324LA8MWY0 1029 aaPredicted RBP4.57□□□□□ -1.68
CALD1-221ENST00000489019 NEFMP07197 916 aa4.57□□□□□ -1.68
CALD1-221ENST00000489019 CTSHP09668 335 aa4.57□□□□□ -1.68
CALD1-221ENST00000489019 HCLS1P14317 486 aaPredicted RBP4.57□□□□□ -1.68
CALD1-221ENST00000489019 PTPN11Q06124 597 aaPredicted RBP4.57□□□□□ -1.68
CALD1-221ENST00000489019 MAP7Q14244 749 aa4.57□□□□□ -1.68
CALD1-221ENST00000489019 LLGL2Q6P1M3 1020 aa4.57□□□□□ -1.68
CALD1-221ENST00000489019 ATXN3LQ9H3M9 355 aa4.57□□□□□ -1.68
CALD1-221ENST00000489019 RSF1Q96T23 1441 aaPredicted RBP4.56□□□□□ -1.68
CALD1-221ENST00000489019 COBLO75128 1261 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 ADAMTS4O75173 837 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 TRIM37O94972 964 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 NTF4P34130 210 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 FGD1P98174 961 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 RING1Q06587 406 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 PSMD2Q13200 908 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 CCDC85BQ15834 202 aaPredicted RBP4.56□□□□□ -1.68
CALD1-221ENST00000489019 SV2BQ7L1I2 683 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 ZNF765Q7L2R6 523 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 TMC4Q7Z404 712 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 SMYD4Q8IYR2 804 aaPredicted RBP4.56□□□□□ -1.68
CALD1-221ENST00000489019 GAL3ST3Q96A11 431 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 ACSBG1Q96GR2 724 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 PCMTD2Q9NV79 361 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 PIM2Q9P1W9 311 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 CYP8B1Q9UNU6 501 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 SAMM50Q9Y512 469 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 CSADQ9Y600 493 aa4.56□□□□□ -1.68
CALD1-221ENST00000489019 DCDC2CA8MYV0 355 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 SPINK2P20155 84 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 ERVK-24P63145 666 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 CDK5R2Q13319 367 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 PPM1JQ5JR12 505 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 TTBK2Q6IQ55 1244 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.55□□□□□ -1.68
CALD1-221ENST00000489019 UBE3DQ7Z6J8 389 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 C12orf40Q86WS4 652 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 RNF214Q8ND24 703 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 ISL2Q96A47 359 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 OSBPL1AQ9BXW6 950 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 PIDD1Q9HB75 910 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 ATG3Q9NT62 314 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 PCDHA4Q9UN74 947 aa4.55□□□□□ -1.68
CALD1-221ENST00000489019 RNGTTO60942 597 aaKnown RBP4.54□□□□□ -1.68
CALD1-221ENST00000489019 FOSL1P15407 271 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 ERCC3P19447 782 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 CDK8P49336 464 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 HNRNPUQ00839 825 aaKnown RBP eCLIP4.54□□□□□ -1.68
CALD1-221ENST00000489019 XPCQ01831 940 aaPredicted RBP4.54□□□□□ -1.68
CALD1-221ENST00000489019 INPP5AQ14642 412 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 LRRC14Q15048 493 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 MSMPQ1L6U9 139 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 INTS5Q6P9B9 1019 aaKnown RBP4.54□□□□□ -1.68
CALD1-221ENST00000489019 DTX1Q86Y01 620 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 PSMG3-AS1Q96PY0 264 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 LEMD3Q9Y2U8 911 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 PCDHB5Q9Y5E4 795 aa4.54□□□□□ -1.68
CALD1-221ENST00000489019 USP31Q70CQ4 1352 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 SORBS3O60504 671 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 LEFTY1O75610 366 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 GRIK1P39086 918 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 RANGAP1P46060 587 aaPredicted RBP4.53□□□□□ -1.68
CALD1-221ENST00000489019 LIG3P49916 1009 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 SEPT6Q14141 434 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 TAF1CQ15572 869 aaPredicted RBP4.53□□□□□ -1.68
CALD1-221ENST00000489019 MAP3K11Q16584 847 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 CPSF6Q16630 551 aaKnown RBP eCLIP4.53□□□□□ -1.68
CALD1-221ENST00000489019 SCARA3Q6AZY7 606 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 LRFN4Q6PJG9 635 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 OGFOD3Q6PK18 319 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 NBPF11Q86T75 865 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 GIMAP7Q8NHV1 300 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 METTL22Q9BUU2 404 aaPredicted RBP4.53□□□□□ -1.68
CALD1-221ENST00000489019 PCOLCE2Q9UKZ9 415 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 TLR6Q9Y2C9 796 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 U3KQE9 123 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 CECR2Q9BXF3 1484 aa4.53□□□□□ -1.68
CALD1-221ENST00000489019 F6X3S4 739 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 CYP26A1O43174 497 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 FAM87AP0C7U9 286 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 TFE3P19532 575 aaPredicted RBP4.52□□□□□ -1.69
CALD1-221ENST00000489019 ST13P50502 369 aaKnown RBP4.52□□□□□ -1.69
CALD1-221ENST00000489019 RPS26P62854 115 aaKnown RBP4.52□□□□□ -1.69
CALD1-221ENST00000489019 ZBTB37Q5TC79 503 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 AGMOQ6ZNB7 445 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 CYFIP1Q7L576 1253 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.52□□□□□ -1.69
CALD1-221ENST00000489019 PLPPR2Q96GM1 343 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 CRELD1Q96HD1 420 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 DUSP23Q9BVJ7 150 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 BCL2L13Q9BXK5 485 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 LRRC4CQ9HCJ2 640 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 ZC3H7BQ9UGR2 993 aaKnown RBP4.52□□□□□ -1.69
CALD1-221ENST00000489019 MROH2BQ7Z745 1585 aa4.52□□□□□ -1.69
CALD1-221ENST00000489019 ZBTB7CA1YPR0 619 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 PRAMEF27A3QJZ7 478 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 FANCGO15287 622 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 CYP27A1Q02318 531 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms