RNA–Protein interactions for RNA: ENST00000488981.1

NF1-212, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-212ENST00000488981 FAAP100Q0VG06 881 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 PSMD2Q13200 908 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 TAF1CQ15572 869 aaPredicted RBP3.89□□□□□ -1.79
NF1-212ENST00000488981 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 RNF43Q68DV7 783 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 PDZD3Q86UT5 571 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 ARMC10Q8N2F6 343 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 UTP4Q969X6 686 aaKnown RBP3.89□□□□□ -1.79
NF1-212ENST00000488981 CRELD1Q96HD1 420 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 DNAJC2Q99543 621 aaKnown RBP3.89□□□□□ -1.79
NF1-212ENST00000488981 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 ATXN3LQ9H3M9 355 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 RAD18Q9NS91 495 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 CECR2Q9BXF3 1484 aa3.89□□□□□ -1.79
NF1-212ENST00000488981 RBM47A0AV96 593 aaKnown RBP3.88□□□□□ -1.79
NF1-212ENST00000488981 ENC1O14682 589 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 AOC2O75106 756 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 PTMAP06454 111 aaKnown RBP3.88□□□□□ -1.79
NF1-212ENST00000488981 USP17L7P0C7H9 530 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 FSTP19883 344 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 CD97P48960 835 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 CYP27A1Q02318 531 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 INTS5Q6P9B9 1019 aaKnown RBP3.88□□□□□ -1.79
NF1-212ENST00000488981 PAOXQ6QHF9 649 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 PI16Q6UXB8 463 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 SULF2Q8IWU5 870 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 KCT2Q8NC54 265 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 UBASH3BQ8TF42 649 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 METTL22Q9BUU2 404 aaPredicted RBP3.88□□□□□ -1.79
NF1-212ENST00000488981 BCL2L13Q9BXK5 485 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 USP26Q9BXU7 913 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 MRS2Q9HD23 443 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 GPN3Q9UHW5 284 aaPredicted RBP3.88□□□□□ -1.79
NF1-212ENST00000488981 WWC3Q9ULE0 1092 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 SNCAIPQ9Y6H5 919 aa3.88□□□□□ -1.79
NF1-212ENST00000488981 KIAA1324LA8MWY0 1029 aaPredicted RBP3.87□□□□□ -1.79
NF1-212ENST00000488981 FANCGO15287 622 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 GAS2O43903 313 aaKnown RBP3.87□□□□□ -1.79
NF1-212ENST00000488981 ALX3O95076 343 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 DLGAP3O95886 979 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 ADH5P11766 374 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 BMP3P12645 472 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 BMP6P22004 513 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 CANXP27824 592 aaKnown RBP3.87□□□□□ -1.79
NF1-212ENST00000488981 USP11P51784 963 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 ID3Q02535 119 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 FZD5Q13467 585 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 ZC3H12AQ5D1E8 599 aaKnown RBP3.87□□□□□ -1.79
NF1-212ENST00000488981 GPATCH11Q8N954 259 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 C2CD4AQ8NCU7 369 aaPredicted RBP3.87□□□□□ -1.79
NF1-212ENST00000488981 DBNDD2Q9BQY9 259 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 RSRP1Q9BUV0 290 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 CRIM1Q9NZV1 1036 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 RNF114Q9Y508 228 aa3.87□□□□□ -1.79
NF1-212ENST00000488981 FAM95CA0A1B0GW59 222 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 IGLV1-40P01703 118 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 MAP4P27816 1152 aaKnown RBP3.86□□□□□ -1.79
NF1-212ENST00000488981 GRIK1P39086 918 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 PREPP48147 710 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 MFAP1P55081 439 aaKnown RBP3.86□□□□□ -1.79
NF1-212ENST00000488981 FAM193AP78312 1265 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 CALD1Q05682 793 aaKnown RBP3.86□□□□□ -1.79
NF1-212ENST00000488981 NFIAQ12857 509 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 HGSNATQ68CP4 663 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 LLGL2Q6P1M3 1020 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 AGMOQ6ZNB7 445 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 BEND4Q6ZU67 534 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 AGGF1Q8N302 714 aaeCLIP3.86□□□□□ -1.79
NF1-212ENST00000488981 WDR18Q9BV38 432 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 ACSS3Q9H6R3 686 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 ROBO2Q9HCK4 1378 aa3.86□□□□□ -1.79
NF1-212ENST00000488981 TAL1P17542 331 aaPredicted RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 PTMSP20962 102 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 SSTR4P31391 388 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 CAP2P40123 477 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 GP2P55259 537 aaKnown RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 RING1Q06587 406 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 MRPL58Q14197 206 aaKnown RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 PDE3AQ14432 1141 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 CCDC85BQ15834 202 aaPredicted RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 RNF214Q8ND24 703 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 CCDC86Q9H6F5 360 aaKnown RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 C7orf69Q9H7B7 122 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 MKNK2Q9HBH9 465 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 METTL5Q9NRN9 209 aaKnown RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 PCOLCE2Q9UKZ9 415 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 TTF2Q9UNY4 1162 aaKnown RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 PCDHGC5Q9Y5F6 944 aa3.85□□□□□ -1.79
NF1-212ENST00000488981 ARID1BQ8NFD5 2236 aaPredicted RBP3.85□□□□□ -1.79
NF1-212ENST00000488981 CCDC180Q9P1Z9 1646 aa3.84□□□□□ -1.79
NF1-212ENST00000488981 LOC102724159A0A0B4J2E5 919 aa3.84□□□□□ -1.79
NF1-212ENST00000488981 CLGNO14967 610 aa3.84□□□□□ -1.79
NF1-212ENST00000488981 RRP9O43818 475 aaKnown RBP3.84□□□□□ -1.79
NF1-212ENST00000488981 ZNF862O60290 1169 aa3.84□□□□□ -1.79
NF1-212ENST00000488981 ZNF16P17020 682 aaPredicted RBP3.84□□□□□ -1.79
NF1-212ENST00000488981 LMNB1P20700 586 aa3.84□□□□□ -1.79
NF1-212ENST00000488981 ASPAP45381 313 aa3.84□□□□□ -1.79
NF1-212ENST00000488981 PWP2Q15269 919 aaKnown RBP3.84□□□□□ -1.79
NF1-212ENST00000488981 TSNAXIP1Q2TAA8 658 aa3.84□□□□□ -1.79
NF1-212ENST00000488981 PCNX4Q63HM2 1172 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms