RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 DEFB118Q96PH6 123 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 TAOK2Q9UL54 1235 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 GABRQQ9UN88 632 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 DAGLAQ9Y4D2 1042 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 ZHX2Q9Y6X8 837 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 SEMA3EO15041 775 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 NBPF7P0C2Y1 421 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-211ENST00000488809 ELNP15502 786 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 BMP8BP34820 402 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 PABPC4Q13310 644 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTCH1-211ENST00000488809 MOGSQ13724 837 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 GPAT2Q6NUI2 795 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 CDC42EP5Q6NZY7 148 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 ZSCAN29Q8IWY8 852 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-211ENST00000488809 KAZALD1Q96I82 304 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 PAWRQ96IZ0 340 aaKnown RBP8.13□□□□□ -1.11
PTCH1-211ENST00000488809 PAK6Q9NQU5 681 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-211ENST00000488809 USP40Q9NVE5 1235 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 STAP2Q9UGK3 403 aa8.13□□□□□ -1.11
PTCH1-211ENST00000488809 LAMA3Q16787 3333 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 PTPRCP08575 1304 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 SALL1Q9NSC2 1324 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 CTNND1O60716 968 aaKnown RBP8.12□□□□□ -1.11
PTCH1-211ENST00000488809 ENTPD3O75355 529 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 HMGCRP04035 888 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 PTPRAP18433 802 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 FGFR2P21802 821 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 NFIAQ12857 509 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 FAM110CQ1W6H9 321 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 C7orf61Q8IZ16 206 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 LRCH3Q96II8 777 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 TBC1D2Q9BYX2 928 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 NBPF3Q9H094 633 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 CRISPLD2Q9H0B8 497 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.12□□□□□ -1.11
PTCH1-211ENST00000488809 FBXO3Q9UK99 471 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 DENND2AQ9ULE3 1009 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 AGTPBP1Q9UPW5 1226 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 SALL2Q9Y467 1007 aaPredicted RBP8.12□□□□□ -1.11
PTCH1-211ENST00000488809 AFG3L2Q9Y4W6 797 aa8.12□□□□□ -1.11
PTCH1-211ENST00000488809 FRMPD3Q5JV73 1810 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 TRIM75PA6NK02 468 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 EYA2O00167 538 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 PRDX5P30044 214 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 GCLCP48506 637 aaPredicted RBP8.11□□□□□ -1.11
PTCH1-211ENST00000488809 RGS3P49796 1198 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 DZIP1Q86YF9 867 aaKnown RBP8.11□□□□□ -1.11
PTCH1-211ENST00000488809 DEFB123Q8N688 67 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 ANKRD13CQ8N6S4 541 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 ANKRD44Q8N8A2 993 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 PROCA1Q8NCQ7 364 aaPredicted RBP8.11□□□□□ -1.11
PTCH1-211ENST00000488809 IDI2Q9BXS1 227 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 MRS2Q9HD23 443 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 HMX1Q9NP08 348 aaPredicted RBP8.11□□□□□ -1.11
PTCH1-211ENST00000488809 SPINK5Q9NQ38 1064 aaPredicted RBP8.11□□□□□ -1.11
PTCH1-211ENST00000488809 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
PTCH1-211ENST00000488809 ATRNL1Q5VV63 1379 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 RPTORQ8N122 1335 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 PHF20L1A8MW92 1017 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-211ENST00000488809 ATP2B3Q16720 1220 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 LRIT3Q3SXY7 679 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 SPTY2D1Q68D10 685 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-211ENST00000488809 TDHQ8IZJ6 230 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 KLHDC4Q8TBB5 520 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 GDF15Q99988 308 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 C11orf49Q9H6J7 331 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 HDAC5Q9UQL6 1122 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 STXBP5LQ9Y2K9 1186 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 PLXNB2O15031 1838 aa8.1□□□□□ -1.11
PTCH1-211ENST00000488809 ZBTB22O15209 634 aa8.09□□□□□ -1.11
PTCH1-211ENST00000488809 CIAO1O76071 339 aa8.09□□□□□ -1.11
PTCH1-211ENST00000488809 MAP3K10Q02779 954 aa8.09□□□□□ -1.11
PTCH1-211ENST00000488809 PICALMQ13492 652 aa8.09□□□□□ -1.11
PTCH1-211ENST00000488809 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
PTCH1-211ENST00000488809 UBE2OQ9C0C9 1292 aaKnown RBP8.09□□□□□ -1.11
PTCH1-211ENST00000488809 OSBPL5Q9H0X9 879 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-211ENST00000488809 AS3MTQ9HBK9 375 aa8.09□□□□□ -1.11
PTCH1-211ENST00000488809 ABCF2Q9UG63 623 aa8.09□□□□□ -1.11
PTCH1-211ENST00000488809 ZMYND8Q9ULU4 1186 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-211ENST00000488809 CUL9Q8IWT3 2517 aa8.09□□□□□ -1.11
PTCH1-211ENST00000488809 RFX7Q2KHR2 1363 aa8.09□□□□□ -1.12
PTCH1-211ENST00000488809 GAKO14976 1311 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 PDS5AQ29RF7 1337 aaKnown RBP8.08□□□□□ -1.12
PTCH1-211ENST00000488809 COL2A1P02458 1487 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-211ENST00000488809 TBC1D12O60347 775 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 MAP4K4O95819 1239 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-211ENST00000488809 BTDP43251 543 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 CCDC184Q52MB2 194 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 ZNF280CQ8ND82 737 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 DIS3LQ8TF46 1054 aaKnown RBP8.08□□□□□ -1.12
PTCH1-211ENST00000488809 SOCS4Q8WXH5 440 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 FAM163AQ96GL9 167 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-211ENST00000488809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTCH1-211ENST00000488809 FOCADQ5VW36 1801 aa8.08□□□□□ -1.12
PTCH1-211ENST00000488809 MAST2Q6P0Q8 1798 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms