RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 SOGA3Q5TF21 947 aa23.67■■□□□ 1.38
ATP1A1-208ENST00000488733 NSUN7Q8NE18 718 aaKnown RBP23.67■■□□□ 1.38
ATP1A1-208ENST00000488733 NOL10Q9BSC4 688 aaKnown RBP23.67■■□□□ 1.38
ATP1A1-208ENST00000488733 FAM205AQ6ZU69 1335 aa23.66■■□□□ 1.38
ATP1A1-208ENST00000488733 SLF2Q8IX21 1173 aa23.66■■□□□ 1.38
ATP1A1-208ENST00000488733 FAM184AQ8NB25 1140 aa23.66■■□□□ 1.38
ATP1A1-208ENST00000488733 GPHNQ9NQX3 736 aaPredicted RBP23.66■■□□□ 1.38
ATP1A1-208ENST00000488733 ZSWIM5Q9P217 1185 aa23.66■■□□□ 1.38
ATP1A1-208ENST00000488733 BRPF3Q9ULD4 1205 aa23.66■■□□□ 1.38
ATP1A1-208ENST00000488733 VPS37CA5D8V6 355 aaPredicted RBP23.65■■□□□ 1.38
ATP1A1-208ENST00000488733 MINDY4BA8MYZ0 360 aa23.65■■□□□ 1.38
ATP1A1-208ENST00000488733 LIFRP42702 1097 aa23.65■■□□□ 1.38
ATP1A1-208ENST00000488733 PPP4CP60510 307 aa23.65■■□□□ 1.38
ATP1A1-208ENST00000488733 CCT2P78371 535 aaKnown RBP23.65■■□□□ 1.38
ATP1A1-208ENST00000488733 SART3Q15020 963 aaKnown RBP23.65■■□□□ 1.38
ATP1A1-208ENST00000488733 IGDCC4Q8TDY8 1250 aa23.65■■□□□ 1.38
ATP1A1-208ENST00000488733 JAK2O60674 1132 aa23.64■■□□□ 1.38
ATP1A1-208ENST00000488733 KDM4AO75164 1064 aa23.64■■□□□ 1.38
ATP1A1-208ENST00000488733 PRPF40AO75400 957 aaKnown RBP23.64■■□□□ 1.38
ATP1A1-208ENST00000488733 KLHL40Q2TBA0 621 aa23.64■■□□□ 1.38
ATP1A1-208ENST00000488733 SGMS1Q86VZ5 419 aa23.64■■□□□ 1.38
ATP1A1-208ENST00000488733 PSMD1Q99460 953 aa23.64■■□□□ 1.38
ATP1A1-208ENST00000488733 GOLGA8BA8MQT2 603 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 GTF2IP78347 998 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 KIAA2012Q0VF49 1180 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 SBK1Q52WX2 424 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 TMEM67Q5HYA8 995 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 TMTC2Q8N394 836 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 DBNDD1Q9H9R9 158 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 DCP1AQ9NPI6 582 aaPredicted RBP23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 SUGT1Q9Y2Z0 365 aa23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 DDX49Q9Y6V7 483 aaKnown RBP23.64■■□□□ 1.37
ATP1A1-208ENST00000488733 PTPDC1A2A3K4 754 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 CTDNEP1O95476 244 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 DEKP35659 375 aaKnown RBP23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 AOC3Q16853 763 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 MFSD14BQ5SR56 506 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 CTR9Q6PD62 1173 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 PODNQ7Z5L7 613 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 ESR2Q92731 530 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 TOMM22Q9NS69 142 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 ARPP21Q9UBL0 812 aaPredicted RBP23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 TACC3Q9Y6A5 838 aa23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 BRCA1P38398 1863 aaKnown RBP23.63■■□□□ 1.37
ATP1A1-208ENST00000488733 IFIT3O14879 490 aaKnown RBP23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 SLC3A2P08195 630 aaKnown RBP23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 FGRP09769 529 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 NCOA5Q9HCD5 579 aaKnown RBP23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 INCENPQ9NQS7 918 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 HPS5Q9UPZ3 1129 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 MROH7-TTC4A0A0A0MT08 1334 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 ERICH2A1L162 156 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 USP17L12C9JPN9 530 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 USP17L21D6R901 530 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 PPIP5K2O43314 1243 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 GRIK5Q16478 980 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 RRP12Q5JTH9 1297 aaKnown RBP23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 FAM163AQ96GL9 167 aaPredicted RBP23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 LY9Q9HBG7 655 aa23.62■■□□□ 1.37
ATP1A1-208ENST00000488733 GOLGB1Q14789 3259 aaKnown RBP23.61■■□□□ 1.37
ATP1A1-208ENST00000488733 ECE2O60344 883 aa23.61■■□□□ 1.37
ATP1A1-208ENST00000488733 NT5C2P49902 561 aa23.61■■□□□ 1.37
ATP1A1-208ENST00000488733 NFXL1Q6ZNB6 911 aa23.61■■□□□ 1.37
ATP1A1-208ENST00000488733 FBXW7Q969H0 707 aa23.61■■□□□ 1.37
ATP1A1-208ENST00000488733 DDX11Q96FC9 970 aa23.61■■□□□ 1.37
ATP1A1-208ENST00000488733 H3BQV1 296 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 CPLX1O14810 134 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 DTNBO60941 627 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 PLCG2P16885 1265 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 CSPP1Q1MSJ5 1256 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 IFFO2Q5TF58 517 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 APOA5Q6Q788 366 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 NLGN2Q8NFZ4 835 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 NKX2-3Q8TAU0 364 aa23.6■■□□□ 1.37
ATP1A1-208ENST00000488733 CCDC69A6NI79 296 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 SYNE3Q6ZMZ3 975 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 CDC37L1Q7L3B6 337 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 TMEM87AQ8NBN3 555 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 BCS1LQ9Y276 419 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 GPR75-ASB3A0A0A6YYF3 556 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 MBD3O95983 291 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 METAP2P50579 478 aaKnown RBP eCLIP23.59■■□□□ 1.375e-8■□□□□ 10.4
ATP1A1-208ENST00000488733 DIXDC1Q155Q3 683 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 CPLX2Q6PUV4 134 aaKnown RBP23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 UBAC1Q9BSL1 405 aa23.59■■□□□ 1.37
ATP1A1-208ENST00000488733 BAZ2AQ9UIF9 1905 aaKnown RBP23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 ZBTB43O43298 467 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 ORC4O43929 436 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 CDKL5O76039 1030 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 NCLP19338 710 aaKnown RBP23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 USP5P45974 858 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 WTAPQ15007 396 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 AMOTL1Q8IY63 956 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 RGS22Q8NE09 1264 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 CHAMP1Q96JM3 812 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 ZSCAN16Q9H4T2 348 aaPredicted RBP23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 ZNF277Q9NRM2 450 aaPredicted RBP23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 SLC12A7Q9Y666 1083 aa23.58■■□□□ 1.37
ATP1A1-208ENST00000488733 MYH2Q9UKX2 1941 aa23.57■■□□□ 1.36
ATP1A1-208ENST00000488733 RCAN1P53805 252 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms