RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 Q7L0L9 218 aa14.49□□□□□ -0.09
HLA-DOB-209ENST00000488325 UBE2Q1Q7Z7E8 422 aa14.49□□□□□ -0.09
HLA-DOB-209ENST00000488325 GNL3LQ9NVN8 582 aaKnown RBP14.49□□□□□ -0.09
HLA-DOB-209ENST00000488325 VCANP13611 3396 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 GOLIM4O00461 696 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 SGSM2O43147 1006 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 GJA5P36382 358 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 TTF1Q15361 905 aaPredicted RBP14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 MAP3K11Q16584 847 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 CAVIN4Q5BKX8 364 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 GPR153Q6NV75 609 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 APOBEC3FQ8IUX4 373 aaKnown RBP14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 USP26Q9BXU7 913 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 ANKIB1Q9P2G1 1089 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 GGA1Q9UJY5 639 aa14.48□□□□□ -0.09
HLA-DOB-209ENST00000488325 ZFYP08048 801 aaPredicted RBP14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 PHKA1P46020 1223 aa14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 MTFR1Q15390 333 aa14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 CWC27Q6UX04 472 aaKnown RBP14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 OGFOD1Q8N543 542 aa14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 ANO2Q9NQ90 1003 aa14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 PRDM6Q9NQX0 595 aa14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 LEMD3Q9Y2U8 911 aa14.47□□□□□ -0.09
HLA-DOB-209ENST00000488325 XDHP47989 1333 aa14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 ZNF646O15015 1829 aaPredicted RBP14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 TESPA1A2RU30 521 aaPredicted RBP14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 NMIQ13287 307 aaPredicted RBP14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 ZSCAN25Q6NSZ9 544 aa14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 NKX2-3Q8TAU0 364 aa14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 EDC3Q96F86 508 aaKnown RBP14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 IPO9Q96P70 1041 aaKnown RBP14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 MTMR10Q9NXD2 777 aa14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 A0A1B0GUL6 1792 aa14.46□□□□□ -0.09
HLA-DOB-209ENST00000488325 ZNF804BA4D1E1 1349 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 SSC5DA1L4H1 1573 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 MCAMP43121 646 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 ZAP70P43403 619 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 BECN1Q14457 450 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 PODNQ7Z5L7 613 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 VPS37DQ86XT2 251 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 SNRKQ9NRH2 765 aa14.45□□□□□ -0.1
HLA-DOB-209ENST00000488325 SEMA3EO15041 775 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 ZBTB22O15209 634 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 ATP2B4P23634 1241 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 GJA8P48165 433 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 TAF1CQ15572 869 aaPredicted RBP14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 DACT2Q5SW24 774 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 ARHGAP39Q9C0H5 1083 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 DEFB129Q9H1M3 183 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 ZFYVE28Q9HCC9 887 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 DAXXQ9UER7 740 aaPredicted RBP14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 NDUFB9Q9Y6M9 179 aa14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 COL1A1P02452 1464 aaPredicted RBP14.44□□□□□ -0.1
HLA-DOB-209ENST00000488325 ZSWIM8A7E2V4 1837 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 UNCXA6NJT0 531 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 SNAP23O00161 211 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 RNF113AO15541 343 aaKnown RBP14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 BCAMP50895 628 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 SPATA5Q8NB90 893 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 FAM227BQ96M60 508 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 HMG20BQ9P0W2 317 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 DENND2AQ9ULE3 1009 aa14.43□□□□□ -0.1
HLA-DOB-209ENST00000488325 A0A0D9SFI3 127 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 EVI5O60447 810 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 FARP2O94887 1054 aaPredicted RBP14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 GJB1P08034 283 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 ANAPC15P60006 121 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 RASGRF1Q13972 1273 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 MCMDC2Q4G0Z9 681 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 ZMYM1Q5SVZ6 1142 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 C15orf52Q6ZUT6 534 aaKnown RBP14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 FBXO33Q7Z6M2 555 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 FBXW7Q969H0 707 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 LSG1Q9H089 658 aaKnown RBP14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 ANTXR1Q9H6X2 564 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 MED23Q9ULK4 1368 aa14.42□□□□□ -0.1
HLA-DOB-209ENST00000488325 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 MYO3BQ8WXR4 1341 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 SPTBN5Q9NRC6 3674 aaKnown RBP14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 HIBADHP31937 336 aaKnown RBP14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 GYG1P46976 350 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 MAP3K12Q12852 859 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 KIF22Q14807 665 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 RABEP1Q15276 862 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 ZNF804AQ7Z570 1209 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 BRI3BPQ8WY22 251 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 ZBED3Q96IU2 234 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 MS4A4AQ96JQ5 239 aa14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 FAM84BQ96KN1 310 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 PDS5AQ29RF7 1337 aaKnown RBP14.41□□□□□ -0.1
HLA-DOB-209ENST00000488325 FRAT2O75474 233 aaPredicted RBP14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 CYP2E1P05181 493 aaPredicted RBP14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 CCL5P13501 91 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms