RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 ANKRD24Q8TF21 1146 aa8.32□□□□□ -1.08
VPS8-224ENST00000488255 EZH1Q92800 747 aaPredicted RBP8.32□□□□□ -1.08
VPS8-224ENST00000488255 CYP8B1Q9UNU6 501 aa8.32□□□□□ -1.08
VPS8-224ENST00000488255 PCDHGC5Q9Y5F6 944 aa8.32□□□□□ -1.08
VPS8-224ENST00000488255 TRIM37O94972 964 aa8.31□□□□□ -1.08
VPS8-224ENST00000488255 ADMP35318 185 aa8.31□□□□□ -1.08
VPS8-224ENST00000488255 PTPN11Q06124 597 aaPredicted RBP8.31□□□□□ -1.08
VPS8-224ENST00000488255 ZC3H12AQ5D1E8 599 aaKnown RBP8.31□□□□□ -1.08
VPS8-224ENST00000488255 PPM1JQ5JR12 505 aa8.31□□□□□ -1.08
VPS8-224ENST00000488255 ZDHHC13Q8IUH4 622 aa8.31□□□□□ -1.08
VPS8-224ENST00000488255 GSX1Q9H4S2 264 aaPredicted RBP8.31□□□□□ -1.08
VPS8-224ENST00000488255 ATG3Q9NT62 314 aa8.31□□□□□ -1.08
VPS8-224ENST00000488255 PRKAG2Q9UGJ0 569 aa8.31□□□□□ -1.08
VPS8-224ENST00000488255 RNF112Q9ULX5 631 aa8.31□□□□□ -1.08
VPS8-224ENST00000488255 SYNGAP1Q96PV0 1343 aa8.3□□□□□ -1.08
VPS8-224ENST00000488255 F13BP05160 661 aa8.3□□□□□ -1.08
VPS8-224ENST00000488255 SLC51AQ86UW1 340 aa8.3□□□□□ -1.08
VPS8-224ENST00000488255 SMYD4Q8IYR2 804 aaPredicted RBP8.3□□□□□ -1.08
VPS8-224ENST00000488255 OSBPL1AQ9BXW6 950 aa8.3□□□□□ -1.08
VPS8-224ENST00000488255 PCDHB5Q9Y5E4 795 aa8.3□□□□□ -1.08
VPS8-224ENST00000488255 FAM170BA6NMN3 283 aa8.29□□□□□ -1.08
VPS8-224ENST00000488255 LIG3P49916 1009 aa8.29□□□□□ -1.08
VPS8-224ENST00000488255 SEPT6Q14141 434 aa8.29□□□□□ -1.08
VPS8-224ENST00000488255 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.29□□□□□ -1.08
VPS8-224ENST00000488255 Q8N3U1 123 aa8.29□□□□□ -1.08
VPS8-224ENST00000488255 GIMAP7Q8NHV1 300 aa8.29□□□□□ -1.08
VPS8-224ENST00000488255 ELMO3Q96BJ8 720 aa8.29□□□□□ -1.08
VPS8-224ENST00000488255 TLR6Q9Y2C9 796 aa8.29□□□□□ -1.08
VPS8-224ENST00000488255 NEFMP07197 916 aa8.28□□□□□ -1.08
VPS8-224ENST00000488255 CDK5R2Q13319 367 aa8.28□□□□□ -1.08
VPS8-224ENST00000488255 INPP5AQ14642 412 aa8.28□□□□□ -1.08
VPS8-224ENST00000488255 ZAR1Q86SH2 424 aa8.28□□□□□ -1.08
VPS8-224ENST00000488255 ISL2Q96A47 359 aa8.28□□□□□ -1.08
VPS8-224ENST00000488255 CRELD1Q96HD1 420 aa8.28□□□□□ -1.08
VPS8-224ENST00000488255 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
VPS8-224ENST00000488255 PRAMEF27A3QJZ7 478 aa8.27□□□□□ -1.09
VPS8-224ENST00000488255 CDK8P49336 464 aa8.27□□□□□ -1.09
VPS8-224ENST00000488255 ERVK-24P63145 666 aa8.27□□□□□ -1.09
VPS8-224ENST00000488255 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS8-224ENST00000488255 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
VPS8-224ENST00000488255 CACNA2D2Q9NY47 1150 aa8.27□□□□□ -1.09
VPS8-224ENST00000488255 PRR19A6NJB7 356 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 ST13P50502 369 aaKnown RBP8.26□□□□□ -1.09
VPS8-224ENST00000488255 LRFN4Q6PJG9 635 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 RNF214Q8ND24 703 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 GAL3ST3Q96A11 431 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 PLPPR2Q96GM1 343 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 LRRC4CQ9HCJ2 640 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 PCMTD2Q9NV79 361 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 LEMD3Q9Y2U8 911 aa8.26□□□□□ -1.09
VPS8-224ENST00000488255 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
VPS8-224ENST00000488255 COBLO75128 1261 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 MED26O95402 600 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 ZNF16P17020 682 aaPredicted RBP8.25□□□□□ -1.09
VPS8-224ENST00000488255 LRP8Q14114 963 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 WIPI1Q5MNZ9 446 aaPredicted RBP8.25□□□□□ -1.09
VPS8-224ENST00000488255 ARTNQ5T4W7 220 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 SEZ6L2Q6UXD5 910 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 ZNF765Q7L2R6 523 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 GATA6Q92908 595 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 BCL11AQ9H165 835 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 MIR1-1HGQ9H1L0 117 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 ZFP64Q9NPA5 681 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 PIM2Q9P1W9 311 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 PCOLCE2Q9UKZ9 415 aa8.25□□□□□ -1.09
VPS8-224ENST00000488255 TFE3P19532 575 aaPredicted RBP8.24□□□□□ -1.09
VPS8-224ENST00000488255 HOXA10P31260 410 aaPredicted RBP8.24□□□□□ -1.09
VPS8-224ENST00000488255 ITGAEP38570 1179 aa8.24□□□□□ -1.09
VPS8-224ENST00000488255 GRIK1P39086 918 aa8.24□□□□□ -1.09
VPS8-224ENST00000488255 DUSP27Q5VZP5 1158 aa8.24□□□□□ -1.09
VPS8-224ENST00000488255 CDC37L1Q7L3B6 337 aa8.24□□□□□ -1.09
VPS8-224ENST00000488255 HDXQ7Z353 690 aa8.24□□□□□ -1.09
VPS8-224ENST00000488255 UBE3DQ7Z6J8 389 aa8.24□□□□□ -1.09
VPS8-224ENST00000488255 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
VPS8-224ENST00000488255 MINDY4BA8MYZ0 360 aa8.23□□□□□ -1.09
VPS8-224ENST00000488255 FAM87AP0C7U9 286 aa8.23□□□□□ -1.09
VPS8-224ENST00000488255 GBP2P32456 591 aaPredicted RBP8.23□□□□□ -1.09
VPS8-224ENST00000488255 RPS26P62854 115 aaKnown RBP8.23□□□□□ -1.09
VPS8-224ENST00000488255 CYP26A1O43174 497 aa8.22□□□□□ -1.09
VPS8-224ENST00000488255 RLBP1P12271 317 aa8.22□□□□□ -1.09
VPS8-224ENST00000488255 ETF1P62495 437 aaKnown RBP8.22□□□□□ -1.09
VPS8-224ENST00000488255 ZBTB37Q5TC79 503 aa8.22□□□□□ -1.09
VPS8-224ENST00000488255 SCARA3Q6AZY7 606 aa8.22□□□□□ -1.09
VPS8-224ENST00000488255 RELL1Q8IUW5 271 aa8.22□□□□□ -1.09
VPS8-224ENST00000488255 PHC3Q8NDX5 983 aa8.22□□□□□ -1.09
VPS8-224ENST00000488255 METTL22Q9BUU2 404 aaPredicted RBP8.22□□□□□ -1.09
VPS8-224ENST00000488255 LEFTY1O75610 366 aa8.21□□□□□ -1.1
VPS8-224ENST00000488255 FAM160A1Q05DH4 1040 aa8.21□□□□□ -1.1
VPS8-224ENST00000488255 OGFOD3Q6PK18 319 aa8.21□□□□□ -1.1
VPS8-224ENST00000488255 NBPF11Q86T75 865 aa8.21□□□□□ -1.1
VPS8-224ENST00000488255 TOP6BLQ8N6T0 577 aa8.21□□□□□ -1.1
VPS8-224ENST00000488255 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
VPS8-224ENST00000488255 FANCGO15287 622 aa8.2□□□□□ -1.1
VPS8-224ENST00000488255 PF4P02776 101 aa8.2□□□□□ -1.1
VPS8-224ENST00000488255 NTF4P34130 210 aa8.2□□□□□ -1.1
VPS8-224ENST00000488255 CD97P48960 835 aa8.2□□□□□ -1.1
VPS8-224ENST00000488255 CYP27A1Q02318 531 aa8.2□□□□□ -1.1
VPS8-224ENST00000488255 RING1Q06587 406 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms