RNA–Protein interactions for RNA: ENST00000488203.1

CIT-205, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 2

Gene CIT, Length 2,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-205ENST00000488203 PGBD1Q96JS3 809 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 TSPY26PQ9H489 355 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 ZSCAN16Q9H4T2 348 aaPredicted RBP11.25□□□□□ -0.61
CIT-205ENST00000488203 AATFQ9NY61 560 aaKnown RBP eCLIP11.25□□□□□ -0.61
CIT-205ENST00000488203 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 TMEM87BQ96K49 555 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
CIT-205ENST00000488203 ZKSCAN5Q9Y2L8 839 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
CIT-205ENST00000488203 SEMA3EO15041 775 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 ZBTB43O43298 467 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 DHX16O60231 1041 aaKnown RBP11.24□□□□□ -0.61
CIT-205ENST00000488203 PRDM1O75626 825 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 ST5P78524 1137 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 CAMK4Q16566 473 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 C8orf76Q96K31 380 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 KRT23Q9C075 422 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
CIT-205ENST00000488203 GOLGA6L4A6NEF3 574 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 GOLGA8AA7E2F4 631 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 POLR3DP05423 398 aaPredicted RBP11.24□□□□□ -0.61
CIT-205ENST00000488203 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
CIT-205ENST00000488203 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 CNNM2Q9H8M5 875 aa11.24□□□□□ -0.61
CIT-205ENST00000488203 ZHX1Q9UKY1 873 aaPredicted RBP11.24□□□□□ -0.61
CIT-205ENST00000488203 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 ELP1O95163 1332 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 CCDC69A6NI79 296 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 POLRMTO00411 1230 aaKnown RBP11.23□□□□□ -0.61
CIT-205ENST00000488203 APBA3O96018 575 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 CYP2D6P10635 497 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 CRY2Q49AN0 593 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 CMTR1Q8N1G2 835 aaKnown RBP11.23□□□□□ -0.61
CIT-205ENST00000488203 GTPBP4Q9BZE4 634 aaKnown RBP11.23□□□□□ -0.61
CIT-205ENST00000488203 LEMD3Q9Y2U8 911 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 SLC12A7Q9Y666 1083 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 XDHP47989 1333 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 USP17L21D6R901 530 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 RANBP6O60518 1105 aaKnown RBP11.23□□□□□ -0.61
CIT-205ENST00000488203 UFL1O94874 794 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 SGMS1Q86VZ5 419 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 FBXO18Q8NFZ0 1043 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 CHMP4CQ96CF2 233 aa11.23□□□□□ -0.61
CIT-205ENST00000488203 KIF28PB7ZC32 967 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 KIF20AO95235 890 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 LIFRP42702 1097 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 WTAPQ15007 396 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 NTRK3Q16288 839 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 COL23A1Q86Y22 540 aaPredicted RBP11.22□□□□□ -0.61
CIT-205ENST00000488203 DZIP1Q86YF9 867 aaKnown RBP11.22□□□□□ -0.61
CIT-205ENST00000488203 BICD2Q8TD16 824 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 RBM17Q96I25 401 aaKnown RBP11.22□□□□□ -0.61
CIT-205ENST00000488203 ALG1Q9BT22 464 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 DACT1Q9NYF0 836 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 CFAP45Q9UL16 551 aa11.22□□□□□ -0.61
CIT-205ENST00000488203 NR1I2O75469 434 aa11.21□□□□□ -0.61
CIT-205ENST00000488203 RBM6P78332 1123 aaKnown RBP11.21□□□□□ -0.61
CIT-205ENST00000488203 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
CIT-205ENST00000488203 TDRD7Q8NHU6 1098 aaKnown RBP11.21□□□□□ -0.61
CIT-205ENST00000488203 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
CIT-205ENST00000488203 RNF41Q9H4P4 317 aaPredicted RBP11.21□□□□□ -0.61
CIT-205ENST00000488203 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.61
CIT-205ENST00000488203 PDE4CQ08493 712 aa11.21□□□□□ -0.62
CIT-205ENST00000488203 OLFM4Q6UX06 510 aa11.21□□□□□ -0.62
CIT-205ENST00000488203 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.62
CIT-205ENST00000488203 SLC26A6Q9BXS9 759 aa11.21□□□□□ -0.62
CIT-205ENST00000488203 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.62
CIT-205ENST00000488203 PRDM10Q9NQV6 1147 aa11.21□□□□□ -0.62
CIT-205ENST00000488203 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.62
CIT-205ENST00000488203 RCOR1Q9UKL0 485 aa11.21□□□□□ -0.62
CIT-205ENST00000488203 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.62
CIT-205ENST00000488203 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 GUCY1A2P33402 732 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 IARSP41252 1262 aaKnown RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 SYNE3Q6ZMZ3 975 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 CKAP2LQ8IYA6 745 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 ZNF396Q96N95 335 aaPredicted RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 UBAC1Q9BSL1 405 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 POLLQ9UGP5 575 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 ERICH2A1L162 156 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 USP17L8P0C7I0 530 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 SART3Q15020 963 aaKnown RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 FAM47AQ5JRC9 791 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 ZNF804AQ7Z570 1209 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
CIT-205ENST00000488203 ESR2Q92731 530 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 NUP62CLQ9H1M0 184 aa11.2□□□□□ -0.62
CIT-205ENST00000488203 GGA1Q9UJY5 639 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms