RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 OTOP1Q7RTM1 612 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 ERO1AQ96HE7 468 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 ZFYVE28Q9HCC9 887 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 DDX4Q9NQI0 724 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 FPGT-TNNI3KV9GXZ4 949 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 PDS5AQ29RF7 1337 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 FOCADQ5VW36 1801 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 DDTLA6NHG4 134 aaPredicted RBP13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 UQCRFS1P1P0C7P4 283 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 CETPP11597 493 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 PPIL2Q13356 520 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 FAM163AQ96GL9 167 aaPredicted RBP13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 IDI2Q9BXS1 227 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 CCDC8Q9H0W5 538 aaPredicted RBP13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 LRP2BPQ9P2M1 347 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 ZNF112Q9UJU3 913 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 CENPFP49454 3210 aa13.9□□□□□ -0.18
NIPAL3-207ENST00000488155 MAST2Q6P0Q8 1798 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 GPR75-ASB3A0A0A6YYF3 556 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 ZBTB22O15209 634 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 ENTPD3O75355 529 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 LDHCP07864 332 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 PPATQ06203 517 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 EFCC1Q9HA90 598 aa13.89□□□□□ -0.19
NIPAL3-207ENST00000488155 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 FAM196BA6NMK8 535 aa13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 RHBDL3P58872 404 aa13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 CEP85Q6P2H3 762 aa13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 GPR108Q9NPR9 543 aa13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 TLR7Q9NYK1 1049 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 EXOC6BQ9Y2D4 811 aa13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 TNRC18O15417 2968 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-207ENST00000488155 SIPA1L1O43166 1804 aa13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 GSTO1P78417 241 aa13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 DBNLQ9UJU6 430 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 NOP58Q9Y2X3 529 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
NIPAL3-207ENST00000488155 ATRNL1Q5VV63 1379 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 APBB1O00213 710 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 CYP2E1P05181 493 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 ZAP70P43403 619 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 NOL9Q5SY16 702 aaKnown RBP13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 NAA16Q6N069 864 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 SH3RF3Q8TEJ3 882 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 EAF2Q96CJ1 260 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 AATFQ9NY61 560 aaKnown RBP eCLIP13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 CPA4Q9UI42 421 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 PTPN22Q9Y2R2 807 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 ZHX2Q9Y6X8 837 aa13.86□□□□□ -0.19
NIPAL3-207ENST00000488155 PDHXO00330 501 aa13.85□□□□□ -0.19
NIPAL3-207ENST00000488155 TLR2O60603 784 aa13.85□□□□□ -0.19
NIPAL3-207ENST00000488155 SCYL3Q8IZE3 742 aa13.85□□□□□ -0.19
NIPAL3-207ENST00000488155 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
NIPAL3-207ENST00000488155 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-207ENST00000488155 KCNH4Q9UQ05 1017 aa13.85□□□□□ -0.19
NIPAL3-207ENST00000488155 HTTP42858 3142 aa13.85□□□□□ -0.19
NIPAL3-207ENST00000488155 PTPRAP18433 802 aa13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 GADL1Q6ZQY3 521 aa13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 ADGRA1Q86SQ6 560 aa13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 AACSQ86V21 672 aa13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 PTCH2Q9Y6C5 1203 aa13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 MYH7P12883 1935 aa13.84□□□□□ -0.19
NIPAL3-207ENST00000488155 RBBP6Q7Z6E9 1792 aaKnown RBP13.83□□□□□ -0.19
NIPAL3-207ENST00000488155 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-207ENST00000488155 MOGSQ13724 837 aa13.83□□□□□ -0.2
NIPAL3-207ENST00000488155 ANKRD23Q86SG2 305 aa13.83□□□□□ -0.2
NIPAL3-207ENST00000488155 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
NIPAL3-207ENST00000488155 TGFBRAP1Q8WUH2 860 aa13.83□□□□□ -0.2
NIPAL3-207ENST00000488155 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
NIPAL3-207ENST00000488155 MYH8P13535 1937 aa13.83□□□□□ -0.2
NIPAL3-207ENST00000488155 BAZ2AQ9UIF9 1905 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 TRIM75PA6NK02 468 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 CXCL11O14625 94 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 IDH1O75874 414 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 BAG3O95817 575 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 CYP2C8P10632 490 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 MS4A1P11836 297 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 DYNLL1P63167 89 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 LACTBP83111 547 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 MAP3K10Q02779 954 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 KIF22Q14807 665 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms