RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 JAG2Q9Y219 1238 aa5.18□□□□□ -1.58
R3HDM1-219ENST00000488035 B3GALT4O96024 378 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 SLFN14P0C7P3 912 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 MPSTP25325 297 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 CDK5R2Q13319 367 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 AP3B2Q13367 1082 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 TRIM56Q9BRZ2 755 aaKnown RBP5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 WDR18Q9BV38 432 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 LIN7BQ9HAP6 207 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 ZFYVE28Q9HCC9 887 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 EGFL7Q9UHF1 273 aa5.17□□□□□ -1.58
R3HDM1-219ENST00000488035 CEACAM5P06731 702 aa5.16□□□□□ -1.58
R3HDM1-219ENST00000488035 CD96P40200 585 aa5.16□□□□□ -1.58
R3HDM1-219ENST00000488035 ARHGAP4P98171 946 aa5.16□□□□□ -1.58
R3HDM1-219ENST00000488035 GLYCTKQ8IVS8 523 aa5.16□□□□□ -1.58
R3HDM1-219ENST00000488035 PPP1R9AQ9ULJ8 1098 aa5.16□□□□□ -1.58
R3HDM1-219ENST00000488035 SNX11Q9Y5W9 270 aa5.16□□□□□ -1.58
R3HDM1-219ENST00000488035 A0A1W2PP55 124 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 ZNF503-AS2A6NEH8 195 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 FAM13AO94988 1023 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 ECEL1O95672 775 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 AFMP43652 599 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 GRIA4P48058 902 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 OXCT1P55809 520 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 FKBP4Q02790 459 aaKnown RBP eCLIP5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 SPRED3Q2MJR0 410 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 TMCO4Q5TGY1 634 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 SMYD4Q8IYR2 804 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 ASB11Q8WXH4 323 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 LMCD1Q9NZU5 365 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 CRIM1Q9NZV1 1036 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 BIN2Q9UBW5 565 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 MTMR7Q9Y216 660 aa5.15□□□□□ -1.59
R3HDM1-219ENST00000488035 ZSCAN22P10073 491 aaPredicted RBP5.14□□□□□ -1.59
R3HDM1-219ENST00000488035 NPR3P17342 541 aa5.14□□□□□ -1.59
R3HDM1-219ENST00000488035 MFAP1P55081 439 aaKnown RBP5.14□□□□□ -1.59
R3HDM1-219ENST00000488035 ID3Q02535 119 aa5.14□□□□□ -1.59
R3HDM1-219ENST00000488035 SF3B2Q13435 895 aaKnown RBP5.14□□□□□ -1.59
R3HDM1-219ENST00000488035 GALNT12Q8IXK2 581 aa5.14□□□□□ -1.59
R3HDM1-219ENST00000488035 TCF12Q99081 682 aa5.14□□□□□ -1.59
R3HDM1-219ENST00000488035 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 TMPRSS2O15393 492 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 FZD6O60353 706 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 KRT1P04264 644 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 POLR3DP05423 398 aaPredicted RBP5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 SYDE1Q6ZW31 735 aaPredicted RBP5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 FANCD2OSQ96PS1 177 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 DUSP23Q9BVJ7 150 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 TNKS2Q9H2K2 1166 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 CCDC87Q9NVE4 849 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 PCOLCE2Q9UKZ9 415 aa5.13□□□□□ -1.59
R3HDM1-219ENST00000488035 NFIBO00712 420 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 RNGTTO60942 597 aaKnown RBP5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 PTPN12Q05209 780 aaKnown RBP5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 ZP2Q05996 745 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 IKZF1Q13422 519 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 CCDC27Q2M243 656 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 MPZL3Q6UWV2 235 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 DNAJC14Q6Y2X3 702 aaPredicted RBP5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 GJD3Q8N144 294 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 LIN37Q96GY3 246 aaPredicted RBP5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 PLAGL2Q9UPG8 496 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 CTNND2Q9UQB3 1225 aa5.12□□□□□ -1.59
R3HDM1-219ENST00000488035 LEFTY1O75610 366 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 NEFLP07196 543 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 GLI1P08151 1106 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 ITIH2P19823 946 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 ITPKAP23677 461 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 RPS26P11Q5JNZ5 115 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 KIAA0319Q5VV43 1072 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 DISC1Q9NRI5 854 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 GTF2IRD1Q9UHL9 959 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 U3KQE9 123 aa5.11□□□□□ -1.59
R3HDM1-219ENST00000488035 LIG1P18858 919 aa5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 TTLL4Q14679 1199 aa5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 KIF4BQ2VIQ3 1234 aa5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 RGS22Q8NE09 1264 aa5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 CCDC86Q9H6F5 360 aaKnown RBP5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 SSU72Q9NP77 194 aaKnown RBP5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 PRDM7Q9NQW5 492 aa5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 KRT82Q9NSB4 513 aa5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 CCDC9Q9Y3X0 531 aaKnown RBP5.1□□□□□ -1.59
R3HDM1-219ENST00000488035 IGHA2P01877 340 aa5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 MAPK1P28482 360 aa5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 TMEM67Q5HYA8 995 aa5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 FBXO15Q8NCQ5 510 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 WDR89Q96FK6 387 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 KIRREL1Q96J84 757 aa5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 EHD4Q9H223 541 aa5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 DCTN4Q9UJW0 460 aa5.09□□□□□ -1.59
R3HDM1-219ENST00000488035 IGF2BP3O00425 579 aaKnown RBP eCLIP5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 C1QTNF9P0C862 333 aa5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 HCLS1P14317 486 aaPredicted RBP5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 PRR23BQ6ZRT6 265 aa5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 CYFIP1Q7L576 1253 aa5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 TMC7Q7Z402 723 aa5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 TOP6BLQ8N6T0 577 aa5.08□□□□□ -1.6
R3HDM1-219ENST00000488035 GPR182O15218 404 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms