RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 RASA3Q14644 834 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 GIMAP6Q6P9H5 292 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 FAM151AQ8WW52 585 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 OSBPL5Q9H0X9 879 aaPredicted RBP16.8■□□□□ 0.28
NUP188-207ENST00000487952 NAPBQ9H115 298 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 IL25Q9H293 177 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 DDX4Q9NQI0 724 aaKnown RBP16.8■□□□□ 0.28
NUP188-207ENST00000487952 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 PGAP2Q9UHJ9 254 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 PPP2R3BQ9Y5P8 575 aa16.8■□□□□ 0.28
NUP188-207ENST00000487952 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
NUP188-207ENST00000487952 REC8O95072 547 aa16.79■□□□□ 0.28
NUP188-207ENST00000487952 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
NUP188-207ENST00000487952 HSPD1P10809 573 aaKnown RBP16.79■□□□□ 0.28
NUP188-207ENST00000487952 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
NUP188-207ENST00000487952 CDC37L1Q7L3B6 337 aa16.79■□□□□ 0.28
NUP188-207ENST00000487952 DSCC1Q9BVC3 393 aa16.79■□□□□ 0.28
NUP188-207ENST00000487952 DEFB129Q9H1M3 183 aa16.79■□□□□ 0.28
NUP188-207ENST00000487952 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
NUP188-207ENST00000487952 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
NUP188-207ENST00000487952 SAP30BPQ9UHR5 308 aaKnown RBP16.79■□□□□ 0.28
NUP188-207ENST00000487952 SCAF8Q9UPN6 1271 aaKnown RBP16.79■□□□□ 0.28
NUP188-207ENST00000487952 KIF3CO14782 793 aa16.78■□□□□ 0.28
NUP188-207ENST00000487952 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
NUP188-207ENST00000487952 MAP1SQ66K74 1059 aaPredicted RBP16.78■□□□□ 0.28
NUP188-207ENST00000487952 CHADLQ6NUI6 762 aa16.78■□□□□ 0.28
NUP188-207ENST00000487952 USP48Q86UV5 1035 aa16.78■□□□□ 0.28
NUP188-207ENST00000487952 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
NUP188-207ENST00000487952 DHX36Q9H2U1 1008 aaKnown RBP16.78■□□□□ 0.28
NUP188-207ENST00000487952 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
NUP188-207ENST00000487952 CNTNAP1P78357 1384 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 ECM29Q5VYK3 1845 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 ADM5C9JUS6 153 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 ALX1Q15699 326 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 HOOK2Q96ED9 719 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 GLIS2Q9BZE0 524 aaPredicted RBP16.77■□□□□ 0.28
NUP188-207ENST00000487952 TMEM39BQ9GZU3 492 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.28
NUP188-207ENST00000487952 CTNNA3Q9UI47 895 aa16.77■□□□□ 0.28
NUP188-207ENST00000487952 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
NUP188-207ENST00000487952 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
NUP188-207ENST00000487952 USP17L21D6R901 530 aa16.76■□□□□ 0.27
NUP188-207ENST00000487952 SLC4A8Q2Y0W8 1093 aa16.76■□□□□ 0.27
NUP188-207ENST00000487952 ZFPM1Q8IX07 1006 aa16.76■□□□□ 0.27
NUP188-207ENST00000487952 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
NUP188-207ENST00000487952 TRIM34Q9BYJ4 488 aa16.76■□□□□ 0.27
NUP188-207ENST00000487952 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
NUP188-207ENST00000487952 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
NUP188-207ENST00000487952 FGAP02671 866 aa16.75■□□□□ 0.27
NUP188-207ENST00000487952 NF2P35240 595 aa16.75■□□□□ 0.27
NUP188-207ENST00000487952 PTH1RQ03431 593 aa16.75■□□□□ 0.27
NUP188-207ENST00000487952 SUPT20HL1Q3ZLR7 823 aa16.75■□□□□ 0.27
NUP188-207ENST00000487952 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
NUP188-207ENST00000487952 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
NUP188-207ENST00000487952 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
NUP188-207ENST00000487952 LSG1Q9H089 658 aaKnown RBP16.75■□□□□ 0.27
NUP188-207ENST00000487952 MKRN1Q9UHC7 482 aaKnown RBP16.75■□□□□ 0.27
NUP188-207ENST00000487952 COL2A1P02458 1487 aaPredicted RBP16.74■□□□□ 0.27
NUP188-207ENST00000487952 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 DDTLA6NHG4 134 aaPredicted RBP16.74■□□□□ 0.27
NUP188-207ENST00000487952 FOXP2O15409 715 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 TOMM70O94826 608 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
NUP188-207ENST00000487952 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
NUP188-207ENST00000487952 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 PRAMEF18Q5VWM3 479 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 CTR9Q6PD62 1173 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 CDCA5Q96FF9 252 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 PI4KBQ9UBF8 816 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 RBM8AQ9Y5S9 174 aaKnown RBP16.74■□□□□ 0.27
NUP188-207ENST00000487952 ATRNL1Q5VV63 1379 aa16.74■□□□□ 0.27
NUP188-207ENST00000487952 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
NUP188-207ENST00000487952 CYP2D6P10635 497 aa16.73■□□□□ 0.27
NUP188-207ENST00000487952 NBPF12Q5TAG4 269 aaPredicted RBP16.73■□□□□ 0.27
NUP188-207ENST00000487952 C12orf60Q5U649 245 aa16.73■□□□□ 0.27
NUP188-207ENST00000487952 DCAF15Q66K64 600 aa16.73■□□□□ 0.27
NUP188-207ENST00000487952 SH3BP5LQ7L8J4 393 aa16.73■□□□□ 0.27
NUP188-207ENST00000487952 RBM46Q8TBY0 533 aaKnown RBP16.73■□□□□ 0.27
NUP188-207ENST00000487952 MAP4K1Q92918 833 aa16.73■□□□□ 0.27
NUP188-207ENST00000487952 CYP2D7A0A087X1C5 515 aa16.72■□□□□ 0.27
NUP188-207ENST00000487952 ZNF213O14771 459 aa16.72■□□□□ 0.27
NUP188-207ENST00000487952 MCCP23508 829 aa16.72■□□□□ 0.27
NUP188-207ENST00000487952 PPARAQ07869 468 aa16.72■□□□□ 0.27
NUP188-207ENST00000487952 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
NUP188-207ENST00000487952 TEPSINQ96N21 525 aa16.72■□□□□ 0.27
NUP188-207ENST00000487952 ZNF408Q9H9D4 720 aa16.72■□□□□ 0.27
NUP188-207ENST00000487952 UPF2Q9HAU5 1272 aaKnown RBP16.72■□□□□ 0.27
NUP188-207ENST00000487952 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
NUP188-207ENST00000487952 FOCADQ5VW36 1801 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 TRAF5O00463 557 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
NUP188-207ENST00000487952 PLCD1P51178 756 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 HAND2P61296 217 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 RNF20Q5VTR2 975 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 CDAN1Q8IWY9 1227 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 EHD4Q9H223 541 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
NUP188-207ENST00000487952 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms