RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 KIF1CO43896 1103 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 PTPN21Q16825 1174 aa17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 FAM169AQ9Y6X4 670 aa17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ATP7AQ04656 1500 aa17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 MAP3K9P80192 1104 aa17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 IFT20Q8IY31 132 aa17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 AMOTL1Q8IY63 956 aa17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-209ENST00000487676 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 RTN1Q16799 776 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 DBNDD2Q9BQY9 259 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PREX2Q70Z35 1606 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 GCOM1H8Y6P7 765 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CLSTN1O94985 981 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 MYZAPP0CAP1 466 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ENOX2Q16206 610 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 BEND3Q5T5X7 828 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 NSRP1Q9H0G5 558 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 IQUBQ8NA54 791 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ODF2LQ9ULJ1 636 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CYP21A2P08686 494 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 IL15P40933 162 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 NBPF14Q5TI25 921 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 RNF41Q9H4P4 317 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CPSF2Q9P2I0 782 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CEP83Q9Y592 693 aa17.2■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PANX2Q96RD6 677 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 WDR24Q96S15 920 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CTNND2Q9UQB3 1225 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PARP3Q9Y6F1 533 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SECISBP2LQ93073 1101 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 UBA7P41226 1012 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 METTL24Q5JXM2 366 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 WWC2Q6AWC2 1192 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CXorf56Q9H5V9 222 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TULP2O00295 520 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SLC8A1P32418 973 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CORO7P57737 925 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 LMBR1LQ6UX01 489 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ZNF589Q86UQ0 364 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ALDH8A1Q9H2A2 487 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-209ENST00000487676 E7EVH7 732 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 RXRAP19793 462 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SSR1P43307 286 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PAK2Q13177 524 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 OR8K1Q8NGG5 319 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SAMM50Q9Y512 469 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SOWAHDA6NJG2 315 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 BUB1BO60566 1050 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SPATA1Q5VX52 437 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ANGEL1Q9UNK9 670 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 NCKAP5LQ9HCH0 1330 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 LRRC7Q96NW7 1537 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 IQGAP1P46940 1657 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PLCD1P51178 756 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TNNC1P63316 161 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TOGARAM2Q6ZUX3 1019 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CHUKO15111 745 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ATP1A2P50993 1020 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ENOX1Q8TC92 643 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TAB2Q9NYJ8 693 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 EPN1Q9Y6I3 576 aaPredicted RBP17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 WTAPQ15007 396 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 MFSD6Q6ZSS7 791 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ZNF446Q9NWS9 450 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TMCO5BA8MYB1 307 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PPP6R2O75170 966 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ERCC5P28715 1186 aaPredicted RBP17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 NLRP5P59047 1200 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TTF1Q15361 905 aaPredicted RBP17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SEC62Q99442 399 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 FUT8Q9BYC5 575 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CASP14P31944 242 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SNCBQ16143 134 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
HLA-DQB1-209ENST00000487676 GCKP35557 465 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 STAT6P42226 847 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 DIS3L2Q8IYB7 885 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms