RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 ATCAYQ86WG3 371 aa6.16□□□□□ -1.42
USP9X-208ENST00000487625 CLEC4MQ9H2X3 399 aaPredicted RBP6.16□□□□□ -1.42
USP9X-208ENST00000487625 GGNBP2Q9H3C7 697 aa6.16□□□□□ -1.42
USP9X-208ENST00000487625 PRMT3O60678 531 aa6.15□□□□□ -1.42
USP9X-208ENST00000487625 EDN3P14138 238 aa6.15□□□□□ -1.42
USP9X-208ENST00000487625 EFEMP1Q12805 493 aa6.15□□□□□ -1.42
USP9X-208ENST00000487625 PDE3AQ14432 1141 aa6.15□□□□□ -1.42
USP9X-208ENST00000487625 TCERG1LQ5VWI1 586 aa6.15□□□□□ -1.42
USP9X-208ENST00000487625 ABTB2Q8N961 1025 aa6.15□□□□□ -1.42
USP9X-208ENST00000487625 ATXN3LQ9H3M9 355 aa6.15□□□□□ -1.42
USP9X-208ENST00000487625 ABHD4Q8TB40 342 aa6.14□□□□□ -1.43
USP9X-208ENST00000487625 FAM200AQ8TCP9 573 aa6.14□□□□□ -1.43
USP9X-208ENST00000487625 WDR89Q96FK6 387 aaPredicted RBP6.14□□□□□ -1.43
USP9X-208ENST00000487625 MKNK1Q9BUB5 465 aa6.14□□□□□ -1.43
USP9X-208ENST00000487625 VRTNQ9H8Y1 702 aa6.14□□□□□ -1.43
USP9X-208ENST00000487625 DISC1Q9NRI5 854 aa6.14□□□□□ -1.43
USP9X-208ENST00000487625 SEMA3GQ9NS98 782 aa6.14□□□□□ -1.43
USP9X-208ENST00000487625 IGF2BP3O00425 579 aaKnown RBP eCLIP6.13□□□□□ -1.43
USP9X-208ENST00000487625 CLCN7P51798 805 aa6.13□□□□□ -1.43
USP9X-208ENST00000487625 TTLL4Q14679 1199 aa6.13□□□□□ -1.43
USP9X-208ENST00000487625 A0A096LPE4 126 aa6.12□□□□□ -1.43
USP9X-208ENST00000487625 A0A1W2PPZ6 126 aa6.12□□□□□ -1.43
USP9X-208ENST00000487625 RPLP1P05386 114 aaKnown RBP6.12□□□□□ -1.43
USP9X-208ENST00000487625 HCLS1P14317 486 aaPredicted RBP6.12□□□□□ -1.43
USP9X-208ENST00000487625 LIG1P18858 919 aa6.12□□□□□ -1.43
USP9X-208ENST00000487625 DLG4P78352 724 aa6.12□□□□□ -1.43
USP9X-208ENST00000487625 SPATS1Q496A3 300 aa6.12□□□□□ -1.43
USP9X-208ENST00000487625 MCOLN1Q9GZU1 580 aa6.12□□□□□ -1.43
USP9X-208ENST00000487625 RNGTTO60942 597 aaKnown RBP6.11□□□□□ -1.43
USP9X-208ENST00000487625 ID3Q02535 119 aa6.11□□□□□ -1.43
USP9X-208ENST00000487625 EDEM1Q92611 657 aa6.11□□□□□ -1.43
USP9X-208ENST00000487625 ATP13A1Q9HD20 1204 aa6.11□□□□□ -1.43
USP9X-208ENST00000487625 PCOLCE2Q9UKZ9 415 aa6.11□□□□□ -1.43
USP9X-208ENST00000487625 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
USP9X-208ENST00000487625 PCDHGC5Q9Y5F6 944 aa6.11□□□□□ -1.43
USP9X-208ENST00000487625 B3GALT4O96024 378 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 NEFMP07197 916 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 SPRED3Q2MJR0 410 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 ERICH6BQ5W0A0 696 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 GLMNQ92990 594 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 PPP1R12CQ9BZL4 782 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 MYRFQ9Y2G1 1151 aa6.1□□□□□ -1.43
USP9X-208ENST00000487625 RAD21O60216 631 aa6.09□□□□□ -1.43
USP9X-208ENST00000487625 GRIA4P48058 902 aa6.09□□□□□ -1.43
USP9X-208ENST00000487625 FEZF2Q8TBJ5 459 aa6.09□□□□□ -1.43
USP9X-208ENST00000487625 CCDC86Q9H6F5 360 aaKnown RBP6.09□□□□□ -1.43
USP9X-208ENST00000487625 KCTD3Q9Y597 815 aa6.09□□□□□ -1.43
USP9X-208ENST00000487625 MYOCOSA0A1B0GUC4 107 aa6.08□□□□□ -1.44
USP9X-208ENST00000487625 ZNF862O60290 1169 aa6.08□□□□□ -1.44
USP9X-208ENST00000487625 SASH1O94885 1247 aa6.08□□□□□ -1.44
USP9X-208ENST00000487625 ERVFC1P60507 584 aa6.08□□□□□ -1.44
USP9X-208ENST00000487625 C8orf34Q49A92 452 aa6.08□□□□□ -1.44
USP9X-208ENST00000487625 NPAS4Q8IUM7 802 aa6.08□□□□□ -1.44
USP9X-208ENST00000487625 ISL2Q96A47 359 aa6.08□□□□□ -1.44
USP9X-208ENST00000487625 PHACTR2O75167 634 aa6.07□□□□□ -1.44
USP9X-208ENST00000487625 PDGFAP04085 211 aa6.07□□□□□ -1.44
USP9X-208ENST00000487625 SWI5Q1ZZU3 235 aa6.07□□□□□ -1.44
USP9X-208ENST00000487625 ZNF385BQ569K4 471 aa6.07□□□□□ -1.44
USP9X-208ENST00000487625 CCNJLQ8IV13 435 aa6.07□□□□□ -1.44
USP9X-208ENST00000487625 ALPK1Q96QP1 1244 aa6.07□□□□□ -1.44
USP9X-208ENST00000487625 TNFRSF21O75509 655 aa6.06□□□□□ -1.44
USP9X-208ENST00000487625 RAC2P15153 192 aa6.06□□□□□ -1.44
USP9X-208ENST00000487625 DNM1Q05193 864 aaKnown RBP6.06□□□□□ -1.44
USP9X-208ENST00000487625 SSPNQ14714 243 aa6.06□□□□□ -1.44
USP9X-208ENST00000487625 CCDC120Q96HB5 630 aa6.06□□□□□ -1.44
USP9X-208ENST00000487625 HSPA12BQ96MM6 686 aa6.06□□□□□ -1.44
USP9X-208ENST00000487625 GCM1Q9NP62 436 aa6.06□□□□□ -1.44
USP9X-208ENST00000487625 FOXD3Q9UJU5 478 aaPredicted RBP6.06□□□□□ -1.44
USP9X-208ENST00000487625 GNAT3A8MTJ3 354 aa6.05□□□□□ -1.44
USP9X-208ENST00000487625 SEMA7AO75326 666 aa6.05□□□□□ -1.44
USP9X-208ENST00000487625 LMOD1P29536 600 aaPredicted RBP6.05□□□□□ -1.44
USP9X-208ENST00000487625 KIF4BQ2VIQ3 1234 aa6.05□□□□□ -1.44
USP9X-208ENST00000487625 TTC6Q86TZ1 520 aa6.05□□□□□ -1.44
USP9X-208ENST00000487625 TMEM151BQ8IW70 566 aa6.05□□□□□ -1.44
USP9X-208ENST00000487625 DDX54Q8TDD1 881 aaKnown RBP6.05□□□□□ -1.44
USP9X-208ENST00000487625 TCF12Q99081 682 aa6.05□□□□□ -1.44
USP9X-208ENST00000487625 CXXC1Q9P0U4 656 aaPredicted RBP6.05□□□□□ -1.44
USP9X-208ENST00000487625 ACIN1Q9UKV3 1341 aaKnown RBP6.04□□□□□ -1.44
USP9X-208ENST00000487625 SLFN14P0C7P3 912 aa6.04□□□□□ -1.44
USP9X-208ENST00000487625 ZXDAP98168 799 aa6.04□□□□□ -1.44
USP9X-208ENST00000487625 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.04□□□□□ -1.44
USP9X-208ENST00000487625 ZDHHC14Q8IZN3 488 aa6.04□□□□□ -1.44
USP9X-208ENST00000487625 SNX29Q8TEQ0 813 aa6.04□□□□□ -1.44
USP9X-208ENST00000487625 MYLIPQ8WY64 445 aa6.04□□□□□ -1.44
USP9X-208ENST00000487625 ADAM7Q9H2U9 754 aa6.04□□□□□ -1.44
USP9X-208ENST00000487625 RFXAPO00287 272 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 PCSK2P16519 638 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 TNFRSF1AP19438 455 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 AP3B2Q13367 1082 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 TEPSINQ96N21 525 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 ZC3H12CQ9C0D7 883 aaKnown RBP6.03□□□□□ -1.44
USP9X-208ENST00000487625 RNF32Q9H0A6 362 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 PRDM10Q9NQV6 1147 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 SLAMF8Q9P0V8 285 aa6.03□□□□□ -1.44
USP9X-208ENST00000487625 PEX10O60683 326 aa6.02□□□□□ -1.45
USP9X-208ENST00000487625 HPXP02790 462 aa6.02□□□□□ -1.45
USP9X-208ENST00000487625 FAM69CQ0P6D2 419 aa6.02□□□□□ -1.45
USP9X-208ENST00000487625 SGPP1Q9BX95 441 aa6.02□□□□□ -1.45
USP9X-208ENST00000487625 ZNF576Q9H609 170 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms