RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	INCENP	Q9NQS7	918 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	ADD2	P35612	726 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	TMEM139	Q8IV31	216 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	WDR24	Q96S15	920 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	UBN2	Q6ZU65	1347 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	AKAP11	Q9UKA4	1901 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZNF827	Q17R98	1081 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	TMEM67	Q5HYA8	995 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	TOGARAM2	Q6ZUX3	1019 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	FCHSD1	Q86WN1	690 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	TRMT44	Q8IYL2	757 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	SYNE4	Q8N205	404 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	KRI1	Q8N9T8	703 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	NFE2L3	Q9Y4A8	694 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	TCIRG1	Q13488	830 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	TEX35	Q5T0J7	233 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	LDHAL6A	Q6ZMR3	332 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	HOOK1	Q9UJC3	728 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	FAM237A	A0A1B0GTK4	181 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	BTBD18	B2RXH4	712 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	POLR2D	O15514	142 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	PRR29	P0C7W0	189 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	GRIN1	Q05586	938 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	SSRP1	Q08945	709 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	NTRK3	Q16288	839 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	GRAMD1C	Q8IYS0	662 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	CCDC82	Q8N4S0	544 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	MPHOSPH8	Q99549	860 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	DESI2	Q9BSY9	194 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	ISCA1	Q9BUE6	129 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	SLC12A7	Q9Y666	1083 aa		11.22	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZNF532	Q9HCE3	1301 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	ADAMTSL3	P82987	1691 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZBTB22	O15209	634 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	TPM1	P09493	284 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	ATP2B1	P20020	1258 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	FMR1	Q06787	632 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	POSTN	Q15063	836 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	SPECC1L	Q69YQ0	1117 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	NOSTRIN	Q8IVI9	506 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	TC2N	Q8N9U0	490 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZCRB1	Q8TBF4	217 aa	Known RBP	11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	IGDCC4	Q8TDY8	1250 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	AIDA	Q96BJ3	306 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	TMEM87B	Q96K49	555 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	LY9	Q9HBG7	655 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	PIH1D3	Q9NQM4	214 aa	Known RBP	11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	CNNM1	Q9NRU3	951 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	FBXO3	Q9UK99	471 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	MAN1B1	Q9UKM7	699 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	KCNJ14	Q9UNX9	436 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	PCDH11X	Q9BZA7	1347 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	PCDH11Y	Q9BZA8	1340 aa		11.21	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZNF142	P52746	1687 aa	Predicted RBP	11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	IFIT3	O14879	490 aa	Known RBP	11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	MYO1B	O43795	1136 aa		11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	ATF3	P18847	181 aa		11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	CYP2C19	P33261	490 aa		11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	CTDSPL2	Q05D32	466 aa		11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	PPP2R3A	Q06190	1150 aa		11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	KARS	Q15046	597 aa	Known RBP	11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	CCDC34	Q96HJ3	373 aa		11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	SERTAD1	Q9UHV2	236 aa		11.21	□□□□□ -0.62
ZNF3-215	ENST00000487620	ABCC12	Q96J65	1359 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	RIC1	Q4ADV7	1423 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	UBR2	Q8IWV8	1755 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	STX10	O60499	249 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	ITGA6	P23229	1130 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	GUCY1A2	P33402	732 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	MDM2	Q00987	491 aa	Predicted RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	TBX2	Q13207	712 aa	Predicted RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	TTF1	Q15361	905 aa	Predicted RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	SAFB	Q15424	915 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	SMARCE1	Q969G3	411 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	TOMM22	Q9NS69	142 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	WWC3	Q9ULE0	1092 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	CHD4	Q14839	1912 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	KCP	Q6ZWJ8	1503 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	GOLGA6L9	A6NEM1	432 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	PCCA	P05165	728 aa	Predicted RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	GPT	P24298	496 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	FAM193A	P78312	1265 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	MAP3K9	P80192	1104 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	RRP12	Q5JTH9	1297 aa	Known RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	TOM1L2	Q6ZVM7	507 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	DIS3L2	Q8IYB7	885 aa	Known RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	CMTR1	Q8N1G2	835 aa	Known RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	RGS22	Q8NE09	1264 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	GREM2	Q9H772	168 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	SAMSN1	Q9NSI8	373 aa	Known RBP	11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	PODXL2	Q9NZ53	605 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	CALCOCO1	Q9P1Z2	691 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	ZSWIM5	Q9P217	1185 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	TBC1D2B	Q9UPU7	963 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	RIPOR2	Q9Y4F9	1068 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	MRFAP1	Q9Y605	127 aa		11.2	□□□□□ -0.62
ZNF3-215	ENST00000487620	PARP4	Q9UKK3	1724 aa	Known RBP	11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms