RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 ZKSCAN4Q969J2 545 aaPredicted RBP12.3□□□□□ -0.44
CDK11A-217ENST00000487462 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
CDK11A-217ENST00000487462 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDK11A-217ENST00000487462 SYNGAP1Q96PV0 1343 aa12.3□□□□□ -0.44
CDK11A-217ENST00000487462 REV3LO60673 3130 aa12.29□□□□□ -0.44
CDK11A-217ENST00000487462 CTSWP56202 376 aa12.29□□□□□ -0.44
CDK11A-217ENST00000487462 IRF5Q13568 498 aa12.29□□□□□ -0.44
CDK11A-217ENST00000487462 SEMA6BQ9H3T3 888 aa12.29□□□□□ -0.44
CDK11A-217ENST00000487462 GREM2Q9H772 168 aa12.29□□□□□ -0.44
CDK11A-217ENST00000487462 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
CDK11A-217ENST00000487462 PFASO15067 1338 aa12.29□□□□□ -0.44
CDK11A-217ENST00000487462 LTBP2Q14767 1821 aa12.28□□□□□ -0.44
CDK11A-217ENST00000487462 TCP10L2B9ZVM9 353 aa12.28□□□□□ -0.44
CDK11A-217ENST00000487462 RBM5P52756 815 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDK11A-217ENST00000487462 WRNIP1Q96S55 665 aa12.28□□□□□ -0.44
CDK11A-217ENST00000487462 C11orf49Q9H6J7 331 aa12.28□□□□□ -0.44
CDK11A-217ENST00000487462 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
CDK11A-217ENST00000487462 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
CDK11A-217ENST00000487462 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
CDK11A-217ENST00000487462 FKBP1AP62942 108 aaKnown RBP12.27□□□□□ -0.45
CDK11A-217ENST00000487462 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
CDK11A-217ENST00000487462 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.45
CDK11A-217ENST00000487462 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
CDK11A-217ENST00000487462 KHSRPQ92945 711 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDK11A-217ENST00000487462 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
CDK11A-217ENST00000487462 JAG2Q9Y219 1238 aa12.27□□□□□ -0.45
CDK11A-217ENST00000487462 SNAP23O00161 211 aa12.26□□□□□ -0.45
CDK11A-217ENST00000487462 NEFMP07197 916 aa12.26□□□□□ -0.45
CDK11A-217ENST00000487462 CYP2C8P10632 490 aa12.26□□□□□ -0.45
CDK11A-217ENST00000487462 PPATQ06203 517 aa12.26□□□□□ -0.45
CDK11A-217ENST00000487462 USP38Q8NB14 1042 aa12.26□□□□□ -0.45
CDK11A-217ENST00000487462 PARK7Q99497 189 aaKnown RBP12.26□□□□□ -0.45
CDK11A-217ENST00000487462 MYD88Q99836 296 aa12.26□□□□□ -0.45
CDK11A-217ENST00000487462 DBF4Q9UBU7 674 aaPredicted RBP12.26□□□□□ -0.45
CDK11A-217ENST00000487462 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
CDK11A-217ENST00000487462 PTPRFP10586 1907 aa12.25□□□□□ -0.45
CDK11A-217ENST00000487462 AK9Q5TCS8 1911 aa12.25□□□□□ -0.45
CDK11A-217ENST00000487462 IL1R1P14778 569 aa12.25□□□□□ -0.45
CDK11A-217ENST00000487462 FOSL2P15408 326 aa12.25□□□□□ -0.45
CDK11A-217ENST00000487462 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
CDK11A-217ENST00000487462 DZIP1LQ8IYY4 767 aaKnown RBP12.25□□□□□ -0.45
CDK11A-217ENST00000487462 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
CDK11A-217ENST00000487462 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
CDK11A-217ENST00000487462 CWC25Q9NXE8 425 aaPredicted RBP12.25□□□□□ -0.45
CDK11A-217ENST00000487462 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
CDK11A-217ENST00000487462 LRRC26Q2I0M4 334 aa12.24□□□□□ -0.45
CDK11A-217ENST00000487462 RIC3Q7Z5B4 369 aa12.24□□□□□ -0.45
CDK11A-217ENST00000487462 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
CDK11A-217ENST00000487462 SERPINA10Q9UK55 444 aa12.24□□□□□ -0.45
CDK11A-217ENST00000487462 OGDHLQ9ULD0 1010 aa12.24□□□□□ -0.45
CDK11A-217ENST00000487462 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 CHD9Q3L8U1 2897 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 COL6A1P12109 1028 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 INPP5BP32019 993 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 TNNI2P48788 182 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 TRIM32Q13049 653 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 NBR1Q14596 966 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 C15orf52Q6ZUT6 534 aaKnown RBP12.23□□□□□ -0.45
CDK11A-217ENST00000487462 FRMPD3Q5JV73 1810 aa12.23□□□□□ -0.45
CDK11A-217ENST00000487462 HMGCRP04035 888 aa12.22□□□□□ -0.45
CDK11A-217ENST00000487462 HOXB7P09629 217 aa12.22□□□□□ -0.45
CDK11A-217ENST00000487462 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
CDK11A-217ENST00000487462 KCNJ4P48050 445 aa12.22□□□□□ -0.45
CDK11A-217ENST00000487462 CACNB3P54284 484 aa12.22□□□□□ -0.45
CDK11A-217ENST00000487462 CHRNDQ07001 517 aa12.22□□□□□ -0.45
CDK11A-217ENST00000487462 SNX27Q96L92 541 aa12.22□□□□□ -0.45
CDK11A-217ENST00000487462 MUC6Q6W4X9 2439 aa12.21□□□□□ -0.45
CDK11A-217ENST00000487462 CHL1O00533 1208 aa12.21□□□□□ -0.45
CDK11A-217ENST00000487462 PHAXQ9H814 394 aaKnown RBP12.21□□□□□ -0.45
CDK11A-217ENST00000487462 TTF2Q9UNY4 1162 aaKnown RBP12.21□□□□□ -0.45
CDK11A-217ENST00000487462 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
CDK11A-217ENST00000487462 MAPK8IP3Q9UPT6 1336 aa12.2□□□□□ -0.46
CDK11A-217ENST00000487462 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
CDK11A-217ENST00000487462 CRKP46108 304 aa12.2□□□□□ -0.46
CDK11A-217ENST00000487462 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
CDK11A-217ENST00000487462 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
CDK11A-217ENST00000487462 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
CDK11A-217ENST00000487462 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
CDK11A-217ENST00000487462 HMX1Q9NP08 348 aaPredicted RBP12.2□□□□□ -0.46
CDK11A-217ENST00000487462 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
CDK11A-217ENST00000487462 PHIPQ8WWQ0 1821 aa12.19□□□□□ -0.46
CDK11A-217ENST00000487462 TAF5LO75529 589 aa12.19□□□□□ -0.46
CDK11A-217ENST00000487462 ITGA6P23229 1130 aa12.19□□□□□ -0.46
CDK11A-217ENST00000487462 RIPK4P57078 832 aa12.19□□□□□ -0.46
CDK11A-217ENST00000487462 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
CDK11A-217ENST00000487462 MIGA2Q7L4E1 593 aa12.19□□□□□ -0.46
CDK11A-217ENST00000487462 METTL22Q9BUU2 404 aaPredicted RBP12.19□□□□□ -0.46
CDK11A-217ENST00000487462 CHD7Q9P2D1 2997 aa12.19□□□□□ -0.46
CDK11A-217ENST00000487462 CACNA1AO00555 2505 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 TULP1O00294 542 aaPredicted RBP12.18□□□□□ -0.46
CDK11A-217ENST00000487462 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 SMAD3P84022 425 aaKnown RBP12.18□□□□□ -0.46
CDK11A-217ENST00000487462 SHHQ15465 462 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 C9orf50Q5SZB4 431 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 DCAF15Q66K64 600 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 COA7Q96BR5 231 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 MPHOSPH8Q99549 860 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 LBHD1Q9BQE6 289 aaPredicted RBP12.18□□□□□ -0.46
CDK11A-217ENST00000487462 ZNF341Q9BYN7 854 aa12.18□□□□□ -0.46
CDK11A-217ENST00000487462 ZNF112Q9UJU3 913 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms