RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 CXCL9Q07325 125 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 KIAA2012Q0VF49 1180 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 FKBP5Q13451 457 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 NCOA4Q13772 614 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 ARID5BQ14865 1188 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 CWF19L2Q2TBE0 894 aaKnown RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 EML3Q32P44 896 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 CCDC152Q4G0S7 254 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 MAP1SQ66K74 1059 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 PNMA8AQ86V59 439 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 KCTD15Q96SI1 283 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 MKRN1Q9UHC7 482 aaKnown RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 LRRC37AA6NMS7 1700 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 NEURL1BA8MQ27 555 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 VAMP4O75379 141 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 GMPSP49915 693 aaPredicted RBP8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 SPRYD7Q5W111 196 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 CIAPIN1Q6FI81 312 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 TRAF7Q6Q0C0 670 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 CNTROBQ8N137 903 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 BCL2L13Q9BXK5 485 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 VPS33BQ9H267 617 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 DBNDD1Q9H9R9 158 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 POLLQ9UGP5 575 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 PASKQ96RG2 1323 aa8.23□□□□□ -1.09
SOX2-OT-210ENST00000487240 YDJCA8MPS7 323 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 WNT7AO00755 349 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 UFL1O94874 794 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 CTSWP56202 376 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 RAB15P59190 212 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 TNIP1Q15025 636 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 UBE3BQ7Z3V4 1068 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 ANKRD18AQ8IVF6 992 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 TBC1D16Q8TBP0 767 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 DNAAF4Q8WXU2 420 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 CDK15Q96Q40 435 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 GPRC5DQ9NZD1 345 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 ANKIB1Q9P2G1 1089 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 TLL2Q9Y6L7 1015 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 CDHR2Q9BYE9 1310 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 ADAMTSL1Q8N6G6 1762 aa8.22□□□□□ -1.09
SOX2-OT-210ENST00000487240 SHTN1A0MZ66 631 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 TMEM88BA6NKF7 163 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 F6X3S4 739 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 ECE2O60344 883 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 ATG7O95352 703 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 FMR1Q06787 632 aaKnown RBP eCLIP8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 INTS6LQ5JSJ4 861 aaKnown RBP8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 ZNF697Q5TEC3 545 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP50Q70EL3 339 aaPredicted RBP8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 JMYQ8N9B5 988 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 EYA3Q99504 573 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 GREM2Q9H772 168 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 KCNQ5Q9NR82 932 aa8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 ADARB2Q9NS39 739 aaKnown RBP8.21□□□□□ -1.1
SOX2-OT-210ENST00000487240 SPEF2Q9C093 1822 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 H7C1W4 665 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 TRAF5O00463 557 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 PSMD14O00487 310 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 SIAH2O43255 324 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 FSHRP23945 695 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 GCKRQ14397 625 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 ZNF598Q86UK7 904 aaKnown RBP8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 TTLL11Q8NHH1 800 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 TRPM4Q8TD43 1214 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 MRGPRX2Q96LB1 330 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 CDC5LQ99459 802 aaKnown RBP8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 PRKD2Q9BZL6 878 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 ABT1Q9ULW3 272 aaKnown RBP8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 NOD1Q9Y239 953 aa8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 V9GY48 417 aaPredicted RBP8.2□□□□□ -1.1
SOX2-OT-210ENST00000487240 PCNTO95613 3336 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 WTIPA6NIX2 430 aaPredicted RBP8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 H7C1D1 291 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 HSPA1AP0DMV8 641 aaKnown RBP8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 HSPA1BP0DMV9 641 aaKnown RBP8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 PDE4CQ08493 712 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 LINS1Q8NG48 757 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 CNOT7Q9UIV1 285 aaKnown RBP8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 XDHP47989 1333 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 CNTNAP1P78357 1384 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 RTL9Q8NET4 1388 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 MYH3P11055 1940 aa8.19□□□□□ -1.1
SOX2-OT-210ENST00000487240 FAM196BA6NMK8 535 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 ADH1CP00326 375 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 RASA1P20936 1047 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 ITGA6P23229 1130 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms