RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PLPPR2Q96GM1 343 aa7.59□□□□□ -1.19
PRPF38A-203ENST00000487160 SHDQ96IW2 340 aa7.59□□□□□ -1.19
PRPF38A-203ENST00000487160 PLVAPQ9BX97 442 aa7.59□□□□□ -1.19
PRPF38A-203ENST00000487160 DCDC2CA8MYV0 355 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 DLL1O00548 723 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 ARHGEF15O94989 841 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 RAC1P63000 192 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 DUOXA2Q1HG44 320 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 CCDC144BQ3MJ40 725 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 EXOSC6Q5RKV6 272 aaKnown RBP7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 SOGA3Q5TF21 947 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 CKAP2LQ8IYA6 745 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 UBASH3BQ8TF42 649 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 ELMO3Q96BJ8 720 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 WDR18Q9BV38 432 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 CSADQ9Y600 493 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 SNCAIPQ9Y6H5 919 aa7.58□□□□□ -1.2
PRPF38A-203ENST00000487160 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 AOC2O75106 756 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 EIF6P56537 245 aaKnown RBP7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 HP1BP3Q5SSJ5 553 aaPredicted RBP7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 ANKS3Q6ZW76 656 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 HDXQ7Z353 690 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 C12orf40Q86WS4 652 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 DCAF11Q8TEB1 546 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 CRBNQ96SW2 442 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 EHMT1Q9H9B1 1298 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 RAD18Q9NS91 495 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 ZNRF3Q9ULT6 936 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 CORINQ9Y5Q5 1042 aa7.57□□□□□ -1.2
PRPF38A-203ENST00000487160 ATE1O95260 518 aa7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 WISP1O95388 367 aa7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 SLFN14P0C7P3 912 aa7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 GIPRP48546 466 aa7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 HNRNPUQ00839 825 aaKnown RBP eCLIP7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 TRIM28Q13263 835 aaKnown RBP7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 ZC3H12AQ5D1E8 599 aaKnown RBP7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 FAM169BQ8N8A8 192 aa7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 PCDHGC5Q9Y5F6 944 aa7.56□□□□□ -1.2
PRPF38A-203ENST00000487160 SMAD7O15105 426 aaKnown RBP7.55□□□□□ -1.2
PRPF38A-203ENST00000487160 KIAA1211Q6ZU35 1233 aa7.55□□□□□ -1.2
PRPF38A-203ENST00000487160 CYFIP1Q7L576 1253 aa7.55□□□□□ -1.2
PRPF38A-203ENST00000487160 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
PRPF38A-203ENST00000487160 PRKAG3Q9UGI9 489 aa7.55□□□□□ -1.2
PRPF38A-203ENST00000487160 MKL2Q9ULH7 1088 aa7.55□□□□□ -1.2
PRPF38A-203ENST00000487160 PRAMEF27A3QJZ7 478 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 GNB5O14775 395 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 HTR3BO95264 441 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 IMPDH2P12268 514 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 AKAP4Q5JQC9 854 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 ACAD11Q709F0 780 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 HNRNPLLQ8WVV9 542 aaKnown RBP7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 TMPRSS13Q9BYE2 586 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 OSBPL2Q9H1P3 480 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 ANTXR1Q9H6X2 564 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 ZSWIM4Q9H7M6 989 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 PPP1R9AQ9ULJ8 1098 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 HIF3AQ9Y2N7 669 aa7.54□□□□□ -1.2
PRPF38A-203ENST00000487160 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 SPDYE3A6NKU9 549 aa7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 KLF4O43474 513 aa7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 ID3Q02535 119 aa7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 PPM1JQ5JR12 505 aa7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 RBBP8NLQ8NC74 664 aaPredicted RBP7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 TACC3Q9Y6A5 838 aa7.53□□□□□ -1.2
PRPF38A-203ENST00000487160 SYNGAP1Q96PV0 1343 aa7.52□□□□□ -1.2
PRPF38A-203ENST00000487160 MEGF11A6BM72 1044 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 PLCG1P19174 1290 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 GRK4P32298 578 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 ERVK-24P63145 666 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 RING1Q06587 406 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 NBPF6Q5VWK0 638 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 NUTM2GQ5VZR2 741 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 GIMAP6Q6P9H5 292 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 RUFY4Q6ZNE9 571 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 NBPF4Q96M43 638 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 TRIM55Q9BYV6 548 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 RNF208Q9H0X6 261 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 PIF1Q9H611 641 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 CRIM1Q9NZV1 1036 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 REV1Q9UBZ9 1251 aa7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
PRPF38A-203ENST00000487160 PIK3R2O00459 728 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 WIPF1O43516 503 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 PGRP06401 933 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 ELNP15502 786 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 ETF1P62495 437 aaKnown RBP7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 PDE4BQ07343 736 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 SERINC3Q13530 473 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 RAB33AQ14088 237 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 GRIK4Q16099 956 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 WNT10AQ9GZT5 417 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms