RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 PTPRFP10586 1907 aa18.75■□□□□ 0.59
PFDN4-204ENST00000487129 SLURP2P0DP57 97 aa18.75■□□□□ 0.59
PFDN4-204ENST00000487129 PTPRAP18433 802 aa18.75■□□□□ 0.59
PFDN4-204ENST00000487129 SH3BP5LQ7L8J4 393 aa18.75■□□□□ 0.59
PFDN4-204ENST00000487129 SCYL3Q8IZE3 742 aa18.75■□□□□ 0.59
PFDN4-204ENST00000487129 WDR66Q8TBY9 1149 aa18.75■□□□□ 0.59
PFDN4-204ENST00000487129 AFG3L2Q9Y4W6 797 aa18.75■□□□□ 0.59
PFDN4-204ENST00000487129 RFX5P48382 616 aaPredicted RBP18.74■□□□□ 0.59
PFDN4-204ENST00000487129 MAP3K10Q02779 954 aa18.74■□□□□ 0.59
PFDN4-204ENST00000487129 SLC45A1Q9Y2W3 748 aa18.74■□□□□ 0.59
PFDN4-204ENST00000487129 ZHX2Q9Y6X8 837 aa18.74■□□□□ 0.59
PFDN4-204ENST00000487129 PHIPQ8WWQ0 1821 aa18.74■□□□□ 0.59
PFDN4-204ENST00000487129 DOCK2Q92608 1830 aa18.73■□□□□ 0.59
PFDN4-204ENST00000487129 IFIT1P09914 478 aaKnown RBP18.73■□□□□ 0.59
PFDN4-204ENST00000487129 BMP8BP34820 402 aa18.73■□□□□ 0.59
PFDN4-204ENST00000487129 MNX1P50219 401 aaPredicted RBP18.73■□□□□ 0.59
PFDN4-204ENST00000487129 FASTKD5Q7L8L6 764 aaKnown RBP18.73■□□□□ 0.59
PFDN4-204ENST00000487129 PAWRQ96IZ0 340 aaKnown RBP18.73■□□□□ 0.59
PFDN4-204ENST00000487129 SALL2Q9Y467 1007 aaPredicted RBP18.73■□□□□ 0.59
PFDN4-204ENST00000487129 MYH13Q9UKX3 1938 aa18.72■□□□□ 0.59
PFDN4-204ENST00000487129 TNPO2O14787 897 aaKnown RBP18.72■□□□□ 0.59
PFDN4-204ENST00000487129 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
PFDN4-204ENST00000487129 CAPN2P17655 700 aa18.72■□□□□ 0.59
PFDN4-204ENST00000487129 USP40Q9NVE5 1235 aa18.72■□□□□ 0.59
PFDN4-204ENST00000487129 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.72■□□□□ 0.59
PFDN4-204ENST00000487129 DOCK3Q8IZD9 2030 aa18.71■□□□□ 0.59
PFDN4-204ENST00000487129 GPR153Q6NV75 609 aa18.71■□□□□ 0.59
PFDN4-204ENST00000487129 ATG9AQ7Z3C6 839 aa18.71■□□□□ 0.59
PFDN4-204ENST00000487129 LPIN2Q92539 896 aa18.71■□□□□ 0.59
PFDN4-204ENST00000487129 IDI2Q9BXS1 227 aa18.71■□□□□ 0.59
PFDN4-204ENST00000487129 RGS3P49796 1198 aa18.7■□□□□ 0.58
PFDN4-204ENST00000487129 GADL1Q6ZQY3 521 aa18.7■□□□□ 0.58
PFDN4-204ENST00000487129 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.7■□□□□ 0.58
PFDN4-204ENST00000487129 USP44Q9H0E7 712 aa18.7■□□□□ 0.58
PFDN4-204ENST00000487129 UNC80Q8N2C7 3258 aa18.7■□□□□ 0.58
PFDN4-204ENST00000487129 AK9Q5TCS8 1911 aa18.7■□□□□ 0.58
PFDN4-204ENST00000487129 SALL1Q9NSC2 1324 aa18.7■□□□□ 0.58
PFDN4-204ENST00000487129 DOCK1Q14185 1865 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 EYA2O00167 538 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 ENTPD3O75355 529 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 SLC5A1P13866 664 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 Q7L0L9 218 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 CCDC84Q86UT8 332 aaPredicted RBP18.69■□□□□ 0.58
PFDN4-204ENST00000487129 ANKRD13CQ8N6S4 541 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 DDX4Q9NQI0 724 aaKnown RBP18.69■□□□□ 0.58
PFDN4-204ENST00000487129 PICK1Q9NRD5 415 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 AGTPBP1Q9UPW5 1226 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 GAKO14976 1311 aa18.69■□□□□ 0.58
PFDN4-204ENST00000487129 DDTLA6NHG4 134 aaPredicted RBP18.68■□□□□ 0.58
PFDN4-204ENST00000487129 TREML2Q5T2D2 321 aa18.68■□□□□ 0.58
PFDN4-204ENST00000487129 NECAB2Q7Z6G3 386 aa18.68■□□□□ 0.58
PFDN4-204ENST00000487129 C7orf61Q8IZ16 206 aa18.68■□□□□ 0.58
PFDN4-204ENST00000487129 SMCR8Q8TEV9 937 aaPredicted RBP18.68■□□□□ 0.58
PFDN4-204ENST00000487129 ZMYND8Q9ULU4 1186 aaPredicted RBP18.68■□□□□ 0.58
PFDN4-204ENST00000487129 TRIM75PA6NK02 468 aa18.67■□□□□ 0.58
PFDN4-204ENST00000487129 LDHBP07195 334 aaKnown RBP18.67■□□□□ 0.58
PFDN4-204ENST00000487129 FAM110CQ1W6H9 321 aa18.67■□□□□ 0.58
PFDN4-204ENST00000487129 LRIT3Q3SXY7 679 aa18.67■□□□□ 0.58
PFDN4-204ENST00000487129 DEFB123Q8N688 67 aa18.67■□□□□ 0.58
PFDN4-204ENST00000487129 ANKLE1Q8NAG6 615 aa18.67■□□□□ 0.58
PFDN4-204ENST00000487129 ZBTB22O15209 634 aa18.66■□□□□ 0.58
PFDN4-204ENST00000487129 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
PFDN4-204ENST00000487129 TRIM32Q13049 653 aa18.66■□□□□ 0.58
PFDN4-204ENST00000487129 MRPL50Q8N5N7 158 aaKnown RBP18.66■□□□□ 0.58
PFDN4-204ENST00000487129 MTMR10Q9NXD2 777 aa18.66■□□□□ 0.58
PFDN4-204ENST00000487129 GJD2Q9UKL4 321 aa18.66■□□□□ 0.58
PFDN4-204ENST00000487129 STXBP5LQ9Y2K9 1186 aa18.66■□□□□ 0.58
PFDN4-204ENST00000487129 LOC285556D6RIA3 1793 aa18.65■□□□□ 0.58
PFDN4-204ENST00000487129 HMGCRP04035 888 aa18.65■□□□□ 0.58
PFDN4-204ENST00000487129 ZEB1P37275 1124 aaPredicted RBP18.65■□□□□ 0.58
PFDN4-204ENST00000487129 MAGEA10P43363 369 aaPredicted RBP18.65■□□□□ 0.58
PFDN4-204ENST00000487129 PHKA1P46020 1223 aa18.65■□□□□ 0.58
PFDN4-204ENST00000487129 COA7Q96BR5 231 aa18.65■□□□□ 0.58
PFDN4-204ENST00000487129 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
PFDN4-204ENST00000487129 DDX60LQ5H9U9 1706 aaKnown RBP18.65■□□□□ 0.58
PFDN4-204ENST00000487129 SYN1P17600 705 aa18.64■□□□□ 0.57
PFDN4-204ENST00000487129 PLXNB2O15031 1838 aa18.64■□□□□ 0.57
PFDN4-204ENST00000487129 MYH2Q9UKX2 1941 aa18.64■□□□□ 0.57
PFDN4-204ENST00000487129 ATP2B3Q16720 1220 aa18.63■□□□□ 0.57
PFDN4-204ENST00000487129 FAM163AQ96GL9 167 aaPredicted RBP18.63■□□□□ 0.57
PFDN4-204ENST00000487129 NBPF3Q9H094 633 aa18.63■□□□□ 0.57
PFDN4-204ENST00000487129 LRRFIP2Q9Y608 721 aaKnown RBP18.63■□□□□ 0.57
PFDN4-204ENST00000487129 PFASO15067 1338 aa18.63■□□□□ 0.57
PFDN4-204ENST00000487129 SEMA3EO15041 775 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 MAP3K21Q5TCX8 1036 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 PROCA1Q8NCQ7 364 aaPredicted RBP18.62■□□□□ 0.57
PFDN4-204ENST00000487129 ZNF384Q8TF68 577 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 TRIB2Q92519 343 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 OGDHLQ9ULD0 1010 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 DENND2AQ9ULE3 1009 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 RPTORQ8N122 1335 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
PFDN4-204ENST00000487129 PTPRCP08575 1304 aa18.61■□□□□ 0.57
PFDN4-204ENST00000487129 FAM196BA6NMK8 535 aa18.61■□□□□ 0.57
PFDN4-204ENST00000487129 TBC1D12O60347 775 aa18.61■□□□□ 0.57
PFDN4-204ENST00000487129 CIAO1O76071 339 aa18.61■□□□□ 0.57
PFDN4-204ENST00000487129 ADORA1P30542 326 aa18.61■□□□□ 0.57
PFDN4-204ENST00000487129 RHBDL3P58872 404 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms