RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TRIM29Q14134 588 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 ZNF569Q5MCW4 686 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 ADGRL3Q9HAR2 1447 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 PHKG2P15735 406 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 MRPS25P82663 173 aaKnown RBP14.19□□□□□ -0.14
HSPG2-211ENST00000486901 ZSCAN26Q16670 478 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 DHX16O60231 1041 aaKnown RBP14.19□□□□□ -0.14
HSPG2-211ENST00000486901 IARSP41252 1262 aaKnown RBP14.19□□□□□ -0.14
HSPG2-211ENST00000486901 KIF4BQ2VIQ3 1234 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 SLC4A8Q2Y0W8 1093 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 ACRBPQ8NEB7 543 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 CWC25Q9NXE8 425 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-211ENST00000486901 FAM53CQ9NYF3 392 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 BAZ2BQ9UIF8 2168 aaKnown RBP14.19□□□□□ -0.14
HSPG2-211ENST00000486901 FAM193AP78312 1265 aa14.19□□□□□ -0.14
HSPG2-211ENST00000486901 MB21D2Q8IYB1 491 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-211ENST00000486901 ZSCAN12O43309 604 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 RANBP6O60518 1105 aaKnown RBP14.18□□□□□ -0.14
HSPG2-211ENST00000486901 ATF3P18847 181 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 LONRF2Q1L5Z9 754 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 TMEM67Q5HYA8 995 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 KRT28Q7Z3Y7 464 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 TC2NQ8N9U0 490 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 OXER1Q8TDS5 423 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 PCDHB6Q9Y5E3 794 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 IL15P40933 162 aaPredicted RBP14.18□□□□□ -0.14
HSPG2-211ENST00000486901 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 MAN1B1Q9UKM7 699 aa14.18□□□□□ -0.14
HSPG2-211ENST00000486901 GOLGB1Q14789 3259 aaKnown RBP14.17□□□□□ -0.14
HSPG2-211ENST00000486901 JCADQ9P266 1359 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 EFCAB8A8MWE9 144 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 PRDM1O75626 825 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 EVA1CP58658 441 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 TMEM139Q8IV31 216 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 TEX13AQ9BXU3 409 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-211ENST00000486901 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
HSPG2-211ENST00000486901 CBFA2T2O43439 604 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 RABL6Q3YEC7 729 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-211ENST00000486901 METTL24Q5JXM2 366 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 MED15Q96RN5 788 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 PNKPQ96T60 521 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 NBPF3Q9H094 633 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 RSPH14Q9UHP6 348 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 CACNA1FO60840 1977 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 NALCNQ8IZF0 1738 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 ENC1O14682 589 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 PRKAB2O43741 272 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 RAD9BQ6WBX8 426 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 BRAPQ7Z569 592 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 BLZF1Q9H2G9 400 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 CABP5Q9NP86 173 aa14.17□□□□□ -0.14
HSPG2-211ENST00000486901 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-211ENST00000486901 ARHGAP6O43182 974 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 ZBTB43O43298 467 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 CASP7P55210 303 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 RBL2Q08999 1139 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 APOA5Q6Q788 366 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 LRP10Q7Z4F1 713 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 EPSTI1Q96J88 318 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 TRIM10Q9UDY6 481 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 MTMR7Q9Y216 660 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 PHLPP2Q6ZVD8 1323 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 NOM1Q5C9Z4 860 aaKnown RBP14.16□□□□□ -0.14
HSPG2-211ENST00000486901 DIS3L2Q8IYB7 885 aaKnown RBP14.16□□□□□ -0.14
HSPG2-211ENST00000486901 MIGA1Q8NAN2 632 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 WWC3Q9ULE0 1092 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 ANGEL1Q9UNK9 670 aaKnown RBP14.16□□□□□ -0.14
HSPG2-211ENST00000486901 LRRC37A3O60309 1634 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 CHMP4BP1P59074 171 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 POSTNQ15063 836 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 PTPAQ15257 358 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 KCTD19Q17RG1 926 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-211ENST00000486901 SPECC1LQ69YQ0 1117 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 FUT8Q9BYC5 575 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 POLD4Q9HCU8 107 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 FAN1Q9Y2M0 1017 aa14.16□□□□□ -0.14
HSPG2-211ENST00000486901 MCAMP43121 646 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 NCAPH2Q6IBW4 605 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 CAPZA3Q96KX2 299 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 VPS16Q9H269 839 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 AKAP17AQ02040 695 aaKnown RBP14.15□□□□□ -0.14
HSPG2-211ENST00000486901 LDHAL6AQ6ZMR3 332 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 GSPT2Q8IYD1 628 aaKnown RBP14.15□□□□□ -0.14
HSPG2-211ENST00000486901 RIN2Q8WYP3 895 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-211ENST00000486901 ABCB6Q9NP58 842 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 MRFAP1Q9Y605 127 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
HSPG2-211ENST00000486901 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
HSPG2-211ENST00000486901 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.14□□□□□ -0.15
HSPG2-211ENST00000486901 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
HSPG2-211ENST00000486901 PIH1D3Q9NQM4 214 aaKnown RBP14.14□□□□□ -0.15
HSPG2-211ENST00000486901 RAI14Q9P0K7 980 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms