RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CCDC178Q5BJE1 867 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 MFSD14BQ5SR56 506 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 ATL3Q6DD88 541 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 APOA5Q6Q788 366 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 ZNF622Q969S3 477 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRKCB-207ENST00000486868 VPS33BQ9H267 617 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 BRPF3Q9ULD4 1205 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 PTPDC1A2A3K4 754 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 GOLGA8BA8MQT2 603 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 USP17L12C9JPN9 530 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 USP17L21D6R901 530 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
PRKCB-207ENST00000486868 KDM4AO75164 1064 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
PRKCB-207ENST00000486868 PDE4BQ07343 736 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 SYNE3Q6ZMZ3 975 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 CHST3Q7LGC8 479 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 AMOTL1Q8IY63 956 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 TACC3Q9Y6A5 838 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 EP400Q96L91 3159 aa13.63□□□□□ -0.23
PRKCB-207ENST00000486868 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 MINDY4BA8MYZ0 360 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 ZBTB43O43298 467 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 JAK2O60674 1132 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 WTAPQ15007 396 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 C12orf60Q5U649 245 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 HHIPL2Q6UWX4 724 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 GPR101Q96P66 508 aaPredicted RBP13.62□□□□□ -0.23
PRKCB-207ENST00000486868 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 SLC12A7Q9Y666 1083 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 DDX49Q9Y6V7 483 aaKnown RBP13.62□□□□□ -0.23
PRKCB-207ENST00000486868 SNED1Q8TER0 1413 aa13.62□□□□□ -0.23
PRKCB-207ENST00000486868 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
PRKCB-207ENST00000486868 CCDC69A6NI79 296 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 CPLX1O14810 134 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 USP5P45974 858 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 METAP2P50579 478 aaKnown RBP eCLIP13.61□□□□□ -0.238e-13■□□□□ 10.4
PRKCB-207ENST00000486868 GTF2IP78347 998 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
PRKCB-207ENST00000486868 SEC23AQ15436 765 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 STRIP1Q5VSL9 837 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 UBAC1Q9BSL1 405 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
PRKCB-207ENST00000486868 ELP1O95163 1332 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 STK36Q9NRP7 1315 aa13.61□□□□□ -0.23
PRKCB-207ENST00000486868 MYH13Q9UKX3 1938 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 H3BQV1 296 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
PRKCB-207ENST00000486868 CALM1P0DP23 149 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 CALM2P0DP24 149 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 CALM3P0DP25 149 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 COL11A2P13942 1736 aaPredicted RBP13.6□□□□□ -0.23
PRKCB-207ENST00000486868 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
PRKCB-207ENST00000486868 BTDP43251 543 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 RHBDL3P58872 404 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 KRT85P78386 507 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 KIAA2012Q0VF49 1180 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 GRIK5Q16478 980 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 SOGA3Q5TF21 947 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 NFXL1Q6ZNB6 911 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 ANKS1AQ92625 1134 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 TCP11L1Q9NUJ3 509 aa13.6□□□□□ -0.23
PRKCB-207ENST00000486868 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 G3V3G9 751 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 FDPSP14324 419 aaKnown RBP13.59□□□□□ -0.23
PRKCB-207ENST00000486868 IFNAR1P17181 557 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 TGFB2P61812 414 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 RESTQ13127 1097 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 DIXDC1Q155Q3 683 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 NTRK3Q16288 839 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 CDC37L1Q7L3B6 337 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 TTLL6Q8N841 843 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 SH3RF3Q8TEJ3 882 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-207ENST00000486868 WASF1Q92558 559 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 ZSCAN10Q96SZ4 725 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-207ENST00000486868 PSMD1Q99460 953 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 SCAND2PQ9GZW5 306 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-207ENST00000486868 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
PRKCB-207ENST00000486868 MCM9Q9NXL9 1143 aa13.59□□□□□ -0.23
PRKCB-207ENST00000486868 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-207ENST00000486868 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
PRKCB-207ENST00000486868 DDAH1O94760 285 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 UBE2HP62256 183 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 CCDC93Q567U6 631 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.24
PRKCB-207ENST00000486868 FOXD4L5Q5VV16 416 aaPredicted RBP13.58□□□□□ -0.24
PRKCB-207ENST00000486868 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 FOXD4L4Q8WXT5 416 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms