RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
SLX4-203ENST00000486524 PYCARDQ9ULZ3 195 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 JAG2Q9Y219 1238 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 CYP2D7A0A087X1C5 515 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 MAGEB6P1A0A0J9YX57 407 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 GNAT2P19087 354 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
SLX4-203ENST00000486524 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 TDRD7Q8NHU6 1098 aaKnown RBP13.07□□□□□ -0.32
SLX4-203ENST00000486524 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 BECN2A8MW95 431 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 BIN1O00499 593 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 GNPATO15228 680 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 GUCY1A2P33402 732 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 ZNF75DP51815 510 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 WTAPQ15007 396 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 NTRK3Q16288 839 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 ERICH2A1L162 156 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 NPHP1O15259 732 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 YEATS4O95619 227 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 PPARAQ07869 468 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 SSRP1Q08945 709 aaKnown RBP13.06□□□□□ -0.32
SLX4-203ENST00000486524 SART3Q15020 963 aaKnown RBP13.06□□□□□ -0.32
SLX4-203ENST00000486524 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 SGMS1Q86VZ5 419 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 NBPF5PQ86XG9 351 aaPredicted RBP13.06□□□□□ -0.32
SLX4-203ENST00000486524 BSDC1Q9NW68 430 aaPredicted RBP13.06□□□□□ -0.32
SLX4-203ENST00000486524 CHD4Q14839 1912 aa13.06□□□□□ -0.32
SLX4-203ENST00000486524 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 TOM1O60784 492 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 HOMEZQ8IX15 550 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 STAG1Q8WVM7 1258 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 COL1A1P02452 1464 aaPredicted RBP13.05□□□□□ -0.32
SLX4-203ENST00000486524 PRDM1O75626 825 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 WDHD1O75717 1129 aaPredicted RBP13.05□□□□□ -0.32
SLX4-203ENST00000486524 LIFRP42702 1097 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 IQCB1Q15051 598 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 ZRSR1Q15695 479 aaKnown RBP13.05□□□□□ -0.32
SLX4-203ENST00000486524 ISM2Q6H9L7 571 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 UBAC1Q9BSL1 405 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
SLX4-203ENST00000486524 A0A1W2PQ27 194 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 A0A1W2PQ64 194 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 A0A1W2PQD8 194 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
SLX4-203ENST00000486524 ZPR1O75312 459 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 TPM2P07951 284 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 LRMPQ12912 555 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 CHAF1AQ13111 956 aaPredicted RBP13.04□□□□□ -0.32
SLX4-203ENST00000486524 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
SLX4-203ENST00000486524 RTN1Q16799 776 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 FAM84BQ96KN1 310 aaPredicted RBP13.04□□□□□ -0.32
SLX4-203ENST00000486524 MROH7-TTC4A0A0A0MT08 1334 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 RREB1Q92766 1687 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 UQCRHLA0A096LP55 91 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 ZNF202O95125 648 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 UQCRHP07919 91 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 PFKFB1P16118 471 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 AMIGO3Q86WK7 504 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 AOPEPQ8N6M6 819 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 ANO10Q9NW15 660 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
SLX4-203ENST00000486524 ZNF804BA4D1E1 1349 aa13.03□□□□□ -0.32
SLX4-203ENST00000486524 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
SLX4-203ENST00000486524 SLC51AQ86UW1 340 aa13.03□□□□□ -0.32
SLX4-203ENST00000486524 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
SLX4-203ENST00000486524 COL5A3P25940 1745 aaPredicted RBP13.03□□□□□ -0.32
SLX4-203ENST00000486524 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
SLX4-203ENST00000486524 EVX2Q03828 476 aa13.03□□□□□ -0.32
SLX4-203ENST00000486524 SLC39A14Q15043 492 aa13.03□□□□□ -0.32
SLX4-203ENST00000486524 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
SLX4-203ENST00000486524 CEP57L1Q8IYX8 460 aa13.03□□□□□ -0.32
SLX4-203ENST00000486524 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.03□□□□□ -0.32
SLX4-203ENST00000486524 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
SLX4-203ENST00000486524 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
SLX4-203ENST00000486524 EP400Q96L91 3159 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 hCG_1642624A0A1W2PR95 340 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 BTBD18B2RXH4 712 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 FMNL1O95466 1100 aaPredicted RBP13.02□□□□□ -0.32
SLX4-203ENST00000486524 CAVIN2O95810 425 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 ATP2B1P20020 1258 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 DPCR1Q3MIW9 517 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 ZNF384Q8TF68 577 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 LAMB2P55268 1798 aa13.02□□□□□ -0.32
SLX4-203ENST00000486524 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.33
SLX4-203ENST00000486524 SPECC1Q5M775 1068 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms