RNA–Protein interactions for RNA: ENST00000486388.5

UBP1-210, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 928 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-210ENST00000486388 C2CD2LO14523 706 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 NEFMP07197 916 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 EPXP11678 715 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 HOXB4P17483 251 aaPredicted RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 CTCFP49711 727 aaPredicted RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 MTHFSDQ2M296 383 aaKnown RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 C4orf17Q53FE4 359 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 CCDC93Q567U6 631 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 EAPPQ56P03 285 aaPredicted RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 PNMA8AQ86V59 439 aaPredicted RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 LDHDQ86WU2 507 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 NBPF5PQ86XG9 351 aaPredicted RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 RTF1Q92541 710 aaKnown RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 XAGE2Q96GT9 111 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 BTBD6Q96KE9 485 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 CFAP53Q96M91 514 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 TMX4Q9H1E5 349 aaPredicted RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 NRXN2Q9P2S2 1712 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 MKRN1Q9UHC7 482 aaKnown RBP6.29□□□□□ -1.4
UBP1-210ENST00000486388 TBC1D2BQ9UPU7 963 aa6.29□□□□□ -1.4
UBP1-210ENST00000486388 VIRMAQ69YN4 1812 aaKnown RBP6.28□□□□□ -1.4
UBP1-210ENST00000486388 TMEM88BA6NKF7 163 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 DDNO94850 711 aaPredicted RBP6.28□□□□□ -1.4
UBP1-210ENST00000486388 SRGNP10124 158 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 ARAFP10398 606 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 NPR1P16066 1061 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 CTBSQ01459 385 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 PRR5LQ6MZQ0 368 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 CLEC4GQ6UXB4 293 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 RTKN2Q8IZC4 609 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 JDP2Q8WYK2 163 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 ZNF496Q96IT1 587 aaPredicted RBP6.28□□□□□ -1.4
UBP1-210ENST00000486388 PRDM10Q9NQV6 1147 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 HACL1Q9UJ83 578 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 NUDCQ9Y266 331 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 HRH3Q9Y5N1 445 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 DICER1Q9UPY3 1922 aaKnown RBP6.28□□□□□ -1.4
UBP1-210ENST00000486388 HEG1Q9ULI3 1381 aa6.28□□□□□ -1.4
UBP1-210ENST00000486388 ADAMTS7Q9UKP4 1686 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 BNIP3LO60238 219 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
UBP1-210ENST00000486388 ALDH1B1P30837 517 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 CHRNA4P43681 627 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 DGKGP49619 791 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 MAP2K1Q02750 393 aaPredicted RBP6.27□□□□□ -1.41
UBP1-210ENST00000486388 CC2D1BQ5T0F9 858 aaKnown RBP6.27□□□□□ -1.41
UBP1-210ENST00000486388 FIGNL1Q6PIW4 674 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 RNF135Q8IUD6 432 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 CCER1Q8TC90 406 aaPredicted RBP6.27□□□□□ -1.41
UBP1-210ENST00000486388 RHBDD1Q8TEB9 315 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 NDFIP2Q9NV92 336 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 ABT1Q9ULW3 272 aaKnown RBP6.27□□□□□ -1.41
UBP1-210ENST00000486388 CNTNAP1P78357 1384 aa6.27□□□□□ -1.41
UBP1-210ENST00000486388 UBR2Q8IWV8 1755 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 FER1L6Q2WGJ9 1857 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 NEURL1BA8MQ27 555 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 CAMTA2O94983 1202 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 A1BGP04217 495 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 SNRPA1P09661 255 aaKnown RBP6.26□□□□□ -1.41
UBP1-210ENST00000486388 EPHX2P34913 555 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 FKBP4Q02790 459 aaKnown RBP eCLIP6.26□□□□□ -1.41
UBP1-210ENST00000486388 CNGB1Q14028 1251 aaPredicted RBP6.26□□□□□ -1.41
UBP1-210ENST00000486388 DEFB115Q30KQ5 88 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 NBPF11Q86T75 865 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 NYXQ9GZU5 481 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 CRISPLD1Q9H336 500 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 TAF1DQ9H5J8 278 aaPredicted RBP6.26□□□□□ -1.41
UBP1-210ENST00000486388 ZFP64Q9NPA5 681 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 NIP7Q9Y221 180 aaKnown RBP eCLIP6.26□□□□□ -1.41
UBP1-210ENST00000486388 SCN4AP35499 1836 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 SCN7AQ01118 1682 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 CACNA1SQ13698 1873 aa6.26□□□□□ -1.41
UBP1-210ENST00000486388 TNRC18O15417 2968 aaPredicted RBP6.25□□□□□ -1.41
UBP1-210ENST00000486388 FOXN1O15353 648 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 ECE1P42892 770 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 EIF6P56537 245 aaKnown RBP6.25□□□□□ -1.41
UBP1-210ENST00000486388 DOC2BQ14184 412 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 TBC1D9Q6ZT07 1266 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 CHSY3Q70JA7 882 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 GPC2Q8N158 579 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 IL17REQ8NFR9 667 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 RPGRQ92834 1020 aaKnown RBP6.25□□□□□ -1.41
UBP1-210ENST00000486388 PCDHGC4Q9Y5F7 938 aa6.25□□□□□ -1.41
UBP1-210ENST00000486388 ANKRD31Q8N7Z5 1873 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 FAM177BA6PVY3 158 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 IARSP41252 1262 aaKnown RBP6.24□□□□□ -1.41
UBP1-210ENST00000486388 LBX1P52954 281 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 TLR1Q15399 786 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 ARTNQ5T4W7 220 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 CNTROBQ8N137 903 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 CCDC85AQ96PX6 553 aaPredicted RBP6.24□□□□□ -1.41
UBP1-210ENST00000486388 ZNF277Q9NRM2 450 aaPredicted RBP6.24□□□□□ -1.41
UBP1-210ENST00000486388 GJA3Q9Y6H8 435 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 SLX4Q8IY92 1834 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 KIF7Q2M1P5 1343 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 RNF123Q5XPI4 1314 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 PASKQ96RG2 1323 aa6.24□□□□□ -1.41
UBP1-210ENST00000486388 ARFGEF2Q9Y6D5 1785 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms