RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ERICH2A1L162 156 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 IFIT3O14879 490 aaKnown RBP13.96□□□□□ -0.17
PKP4-213ENST00000486254 IFNAR1P17181 557 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 PPP4CP60510 307 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 CTDSPL2Q05D32 466 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 NTRK3Q16288 839 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 FOXD4L6Q3SYB3 417 aaPredicted RBP13.96□□□□□ -0.17
PKP4-213ENST00000486254 FOXD4L3Q6VB84 417 aaPredicted RBP13.96□□□□□ -0.17
PKP4-213ENST00000486254 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 WASF1Q92558 559 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 ANP32BQ92688 251 aaKnown RBP13.96□□□□□ -0.17
PKP4-213ENST00000486254 C8orf76Q96K31 380 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.17
PKP4-213ENST00000486254 GGA1Q9UJY5 639 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 SLC12A7Q9Y666 1083 aa13.96□□□□□ -0.17
PKP4-213ENST00000486254 CCDC69A6NI79 296 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 LDHCP07864 332 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 PRDX5P30044 214 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 TXNRD3Q86VQ6 643 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 SP8Q8IXZ3 490 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 TBC1D22AQ8WUA7 517 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 PPP1R9BQ96SB3 815 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 TSPY26PQ9H489 355 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 TFCP2L1Q9NZI6 479 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 NAP1L2Q9ULW6 460 aaPredicted RBP13.96□□□□□ -0.18
PKP4-213ENST00000486254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.96□□□□□ -0.18
PKP4-213ENST00000486254 TACC3Q9Y6A5 838 aa13.96□□□□□ -0.18
PKP4-213ENST00000486254 DDX60LQ5H9U9 1706 aaKnown RBP13.95□□□□□ -0.18
PKP4-213ENST00000486254 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 LDHBP07195 334 aaKnown RBP13.95□□□□□ -0.18
PKP4-213ENST00000486254 SLC3A2P08195 630 aaKnown RBP13.95□□□□□ -0.18
PKP4-213ENST00000486254 WTAPQ15007 396 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 SEC23AQ15436 765 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 RBM43Q6ZSC3 357 aaKnown RBP13.95□□□□□ -0.18
PKP4-213ENST00000486254 DZIP1Q86YF9 867 aaKnown RBP13.95□□□□□ -0.18
PKP4-213ENST00000486254 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 SDR42E1Q8WUS8 393 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 PANK2Q9BZ23 570 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
PKP4-213ENST00000486254 FAM217BQ9NTX9 383 aaPredicted RBP13.95□□□□□ -0.18
PKP4-213ENST00000486254 POLR3EQ9NVU0 708 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 MYH2Q9UKX2 1941 aa13.95□□□□□ -0.18
PKP4-213ENST00000486254 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 NAV1Q8NEY1 1877 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 YEATS4O95619 227 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 GPSM2P81274 684 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 UVSSAQ2YD98 709 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 CTR9Q6PD62 1173 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 FAM163AQ96GL9 167 aaPredicted RBP13.94□□□□□ -0.18
PKP4-213ENST00000486254 RTEL1Q9NZ71 1219 aa13.94□□□□□ -0.18
PKP4-213ENST00000486254 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
PKP4-213ENST00000486254 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 UFL1O94874 794 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
PKP4-213ENST00000486254 BAG3O95817 575 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 CALM1P0DP23 149 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 CALM2P0DP24 149 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 CALM3P0DP25 149 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 NPR1P16066 1061 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 MICU3Q86XE3 530 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 SLF2Q8IX21 1173 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 NKX2-3Q8TAU0 364 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 PDLIM2Q96JY6 352 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 CD209Q9NNX6 404 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 ATP6V0A2Q9Y487 856 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 CDK5RAP2Q96SN8 1893 aa13.93□□□□□ -0.18
PKP4-213ENST00000486254 FOCADQ5VW36 1801 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 DDAH1O94760 285 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 PLCG2P16885 1265 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 CDC27P30260 824 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 PDE6BP35913 854 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 DYNLL1P63167 89 aaKnown RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 KIF23Q02241 960 aaPredicted RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 RTN1Q16799 776 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 FAM173BQ6P4H8 233 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 FUCA2Q9BTY2 467 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 COL11A2P13942 1736 aaPredicted RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 MROH7-TTC4A0A0A0MT08 1334 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 SRGNP10124 158 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 RXRBP28702 533 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 ALDH1B1P30837 517 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 PDE4BQ07343 736 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 CCDC178Q5BJE1 867 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 ZNF654Q8IZM8 581 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 TBC1D16Q8TBP0 767 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms