RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
HMG20B-211ENST00000486028 RASAL3Q86YV0 1011 aa15.1■□□□□ 0.01
HMG20B-211ENST00000486028 CERS3Q8IU89 383 aa15.1■□□□□ 0.01
HMG20B-211ENST00000486028 ZFPM1Q8IX07 1006 aa15.1■□□□□ 0.01
HMG20B-211ENST00000486028 ANKRD13AQ8IZ07 590 aa15.1■□□□□ 0.01
HMG20B-211ENST00000486028 SH3RF3Q8TEJ3 882 aaPredicted RBP15.1■□□□□ 0.01
HMG20B-211ENST00000486028 AIDAQ96BJ3 306 aa15.1■□□□□ 0.01
HMG20B-211ENST00000486028 AATFQ9NY61 560 aaKnown RBP eCLIP15.1■□□□□ 0.01
HMG20B-211ENST00000486028 SSC5DA1L4H1 1573 aa15.1■□□□□ 0.01
HMG20B-211ENST00000486028 ERC2O15083 957 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 IGHDP01880 384 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 HSPA1AP0DMV8 641 aaKnown RBP15.09■□□□□ 0.01
HMG20B-211ENST00000486028 HSPA1BP0DMV9 641 aaKnown RBP15.09■□□□□ 0.01
HMG20B-211ENST00000486028 MAP3K9P80192 1104 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 ADGRA1Q86SQ6 560 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 SMC5Q8IY18 1101 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 EDC3Q96F86 508 aaKnown RBP15.09■□□□□ 0.01
HMG20B-211ENST00000486028 BEGAINQ9BUH8 593 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.09■□□□□ 0.01
HMG20B-211ENST00000486028 DDX4Q9NQI0 724 aaKnown RBP15.09■□□□□ 0.01
HMG20B-211ENST00000486028 WBP1LQ9NX94 342 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.09■□□□□ 0.01
HMG20B-211ENST00000486028 PCNTO95613 3336 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 TTC41PQ6P2S7 1318 aa15.09■□□□□ 0.01
HMG20B-211ENST00000486028 PDE6AP16499 860 aa15.08■□□□□ 0
HMG20B-211ENST00000486028 KIF23Q02241 960 aaPredicted RBP15.08■□□□□ 0
HMG20B-211ENST00000486028 MIGA2Q7L4E1 593 aa15.08■□□□□ 0
HMG20B-211ENST00000486028 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
HMG20B-211ENST00000486028 CLMNQ96JQ2 1002 aa15.08■□□□□ 0
HMG20B-211ENST00000486028 CSRNP1Q96S65 589 aa15.08■□□□□ 0
HMG20B-211ENST00000486028 ZNF341Q9BYN7 854 aa15.08■□□□□ 0
HMG20B-211ENST00000486028 CSADQ9Y600 493 aa15.08■□□□□ 0
HMG20B-211ENST00000486028 RFX7Q2KHR2 1363 aa15.08■□□□□ 0
HMG20B-211ENST00000486028 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
HMG20B-211ENST00000486028 MX1P20591 662 aa15.07■□□□□ 0
HMG20B-211ENST00000486028 TSHZ3Q63HK5 1081 aa15.07■□□□□ 0
HMG20B-211ENST00000486028 ZSCAN25Q6NSZ9 544 aa15.07■□□□□ 0
HMG20B-211ENST00000486028 SH3BP5LQ7L8J4 393 aa15.07■□□□□ 0
HMG20B-211ENST00000486028 MIGA1Q8NAN2 632 aa15.07■□□□□ 0
HMG20B-211ENST00000486028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.07■□□□□ 0
HMG20B-211ENST00000486028 MAGEB6P1A0A0J9YX57 407 aa15.06■□□□□ 0
HMG20B-211ENST00000486028 DYNLL1P63167 89 aaKnown RBP15.06■□□□□ 0
HMG20B-211ENST00000486028 SPRYD7Q5W111 196 aa15.06■□□□□ 0
HMG20B-211ENST00000486028 B4GALNT3Q6L9W6 998 aa15.06■□□□□ 0
HMG20B-211ENST00000486028 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.06■□□□□ 0
HMG20B-211ENST00000486028 OTUD7AQ8TE49 926 aaPredicted RBP15.06■□□□□ 0
HMG20B-211ENST00000486028 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
HMG20B-211ENST00000486028 WRNIP1Q96S55 665 aa15.06■□□□□ 0
HMG20B-211ENST00000486028 ZIC5Q96T25 663 aa15.06■□□□□ 0
HMG20B-211ENST00000486028 OSBPL5Q9H0X9 879 aaPredicted RBP15.06■□□□□ 0
HMG20B-211ENST00000486028 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
HMG20B-211ENST00000486028 TCRBV5S4A2TA0A5A2 114 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 DDTLA6NHG4 134 aaPredicted RBP15.05■□□□□ -0
HMG20B-211ENST00000486028 CA12O43570 354 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 ADD2P35612 726 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 MKRN3Q13064 507 aaKnown RBP15.05■□□□□ -0
HMG20B-211ENST00000486028 VGLL4Q14135 290 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 MAPKAPK5Q8IW41 473 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 WNK4Q96J92 1243 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 LNPKQ9C0E8 428 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 DHX36Q9H2U1 1008 aaKnown RBP15.05■□□□□ -0
HMG20B-211ENST00000486028 ELP3Q9H9T3 547 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 STAP2Q9UGK3 403 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 ZNF112Q9UJU3 913 aa15.05■□□□□ -0
HMG20B-211ENST00000486028 AK9Q5TCS8 1911 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 MYO5AQ9Y4I1 1855 aaKnown RBP15.04■□□□□ -0
HMG20B-211ENST00000486028 MAST2Q6P0Q8 1798 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 ATRNL1Q5VV63 1379 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 ZBTB48P10074 688 aaPredicted RBP15.04■□□□□ -0
HMG20B-211ENST00000486028 USP5P45974 858 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 MAP3K10Q02779 954 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 NUCB1Q02818 461 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 UBE3CQ15386 1083 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 LRRFIP1Q32MZ4 808 aaKnown RBP15.04■□□□□ -0
HMG20B-211ENST00000486028 CHD1LQ86WJ1 897 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 KBTBD3Q8NAB2 608 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 PI4K2BQ8TCG2 481 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 ZKSCAN4Q969J2 545 aaPredicted RBP15.04■□□□□ -0
HMG20B-211ENST00000486028 PI4KBQ9UBF8 816 aa15.04■□□□□ -0
HMG20B-211ENST00000486028 FLT1P17948 1338 aa15.03■□□□□ -0
HMG20B-211ENST00000486028 FOXN1O15353 648 aa15.03■□□□□ -0
HMG20B-211ENST00000486028 TBC1D12O60347 775 aa15.03■□□□□ -0
HMG20B-211ENST00000486028 CTCFP49711 727 aaPredicted RBP15.03■□□□□ -0
HMG20B-211ENST00000486028 INHBEP58166 350 aa15.03■□□□□ -0
HMG20B-211ENST00000486028 SREBF2Q12772 1141 aa15.03■□□□□ -0
HMG20B-211ENST00000486028 OPTNQ96CV9 577 aa15.03■□□□□ -0
HMG20B-211ENST00000486028 RIOK1Q9BRS2 568 aaKnown RBP15.03■□□□□ -0
HMG20B-211ENST00000486028 CRNKL1Q9BZJ0 848 aaKnown RBP15.03■□□□□ -0
HMG20B-211ENST00000486028 COL2A1P02458 1487 aaPredicted RBP15.02■□□□□ -0
HMG20B-211ENST00000486028 SALL3Q9BXA9 1300 aa15.02■□□□□ -0
HMG20B-211ENST00000486028 MANSC4A6NHS7 340 aaPredicted RBP15.02■□□□□ -0
HMG20B-211ENST00000486028 ZFYP08048 801 aaPredicted RBP15.02■□□□□ -0
HMG20B-211ENST00000486028 INPP5BP32019 993 aa15.02■□□□□ -0
HMG20B-211ENST00000486028 TM4SF4P48230 202 aa15.02■□□□□ -0
HMG20B-211ENST00000486028 PDE1AP54750 535 aa15.02■□□□□ -0
HMG20B-211ENST00000486028 ERO1BQ86YB8 467 aa15.02■□□□□ -0
HMG20B-211ENST00000486028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.02■□□□□ -0
HMG20B-211ENST00000486028 SAP30BPQ9UHR5 308 aaKnown RBP15.02■□□□□ -0
HMG20B-211ENST00000486028 SNCAIPQ9Y6H5 919 aa15.02■□□□□ -0
HMG20B-211ENST00000486028 DOCK2Q92608 1830 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms