RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
VPS50-218ENST00000485994 UQCRFS1P1P0C7P4 283 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 PRDX5P30044 214 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 ADORA1P30542 326 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 RASGRF1Q13972 1273 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 TTLL12Q14166 644 aaPredicted RBP8.63□□□□□ -1.03
VPS50-218ENST00000485994 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 CEP85Q6P2H3 762 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 FAM151AQ8WW52 585 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 NEUROD6Q96NK8 337 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 IDI2Q9BXS1 227 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 ZBTB40Q9NUA8 1239 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 RNF186Q9NXI6 227 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 TMOD2Q9NZR1 351 aa8.63□□□□□ -1.03
VPS50-218ENST00000485994 RPAP1Q9BWH6 1393 aaPredicted RBP8.62□□□□□ -1.03
VPS50-218ENST00000485994 GAKO14976 1311 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
VPS50-218ENST00000485994 MANSC4A6NHS7 340 aaPredicted RBP8.62□□□□□ -1.03
VPS50-218ENST00000485994 TCP10L2B9ZVM9 353 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 ALDH1A1P00352 501 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 LDHCP07864 332 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 MAP3K10Q02779 954 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 SREBF2Q12772 1141 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 TNNI3KQ59H18 835 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 CCDC158Q5M9N0 1113 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 CDC42EP5Q6NZY7 148 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 TMED8Q6PL24 325 aaPredicted RBP8.62□□□□□ -1.03
VPS50-218ENST00000485994 IFNLR1Q8IU57 520 aaPredicted RBP8.62□□□□□ -1.03
VPS50-218ENST00000485994 ERC1Q8IUD2 1116 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 ZNF687Q8N1G0 1237 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
VPS50-218ENST00000485994 PANK1Q8TE04 598 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 HMG20BQ9P0W2 317 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 FPGT-TNNI3KV9GXZ4 949 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 LAMB1P07942 1786 aa8.62□□□□□ -1.03
VPS50-218ENST00000485994 SSC5DA1L4H1 1573 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 AK9Q5TCS8 1911 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 GPR75-ASB3A0A0A6YYF3 556 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 ENTPD3O75355 529 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 TRPA1O75762 1119 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 GORABQ5T7V8 394 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.61□□□□□ -1.03
VPS50-218ENST00000485994 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 SPATA5Q8NB90 893 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS50-218ENST00000485994 TMEM39BQ9GZU3 492 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 ZNF112Q9UJU3 913 aa8.61□□□□□ -1.03
VPS50-218ENST00000485994 RAB11FIP3O75154 756 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 HMMRO75330 724 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 MCAMP43121 646 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 GSTO1P78417 241 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 PRKG1Q13976 671 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 DIXDC1Q155Q3 683 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 DCAF15Q66K64 600 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 NSUN4Q96CB9 384 aaKnown RBP8.6□□□□□ -1.03
VPS50-218ENST00000485994 EAF2Q96CJ1 260 aaPredicted RBP8.6□□□□□ -1.03
VPS50-218ENST00000485994 WNK4Q96J92 1243 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 USP40Q9NVE5 1235 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 FAM198AQ9UFP1 575 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 ABCF2Q9UG63 623 aa8.6□□□□□ -1.03
VPS50-218ENST00000485994 TBC1D12O60347 775 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 CACNB3P54284 484 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 RHBDL3P58872 404 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 PPP4CP60510 307 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 MECOMQ03112 1051 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 OS9Q13438 667 aaPredicted RBP8.59□□□□□ -1.03
VPS50-218ENST00000485994 OTUD7BQ6GQQ9 843 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 SIRT2Q8IXJ6 389 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 ZNF384Q8TF68 577 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 CLMNQ96JQ2 1002 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 MS4A4AQ96JQ5 239 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 ZNF341Q9BYN7 854 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
VPS50-218ENST00000485994 MROH7-TTC4A0A0A0MT08 1334 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 WDHD1O75717 1129 aaPredicted RBP8.58□□□□□ -1.04
VPS50-218ENST00000485994 CYP2E1P05181 493 aaPredicted RBP8.58□□□□□ -1.04
VPS50-218ENST00000485994 GJA5P36382 358 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 PPATQ06203 517 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 NFIAQ12857 509 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 PKN2Q16513 984 aaKnown RBP8.58□□□□□ -1.04
VPS50-218ENST00000485994 TTC39AQ5SRH9 613 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 NOL9Q5SY16 702 aaKnown RBP8.58□□□□□ -1.04
VPS50-218ENST00000485994 ERO1BQ86YB8 467 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 DZIP1Q86YF9 867 aaKnown RBP8.58□□□□□ -1.04
VPS50-218ENST00000485994 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS50-218ENST00000485994 KIF1BPQ96EK5 621 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 ZCCHC17Q9NP64 241 aaKnown RBP8.58□□□□□ -1.04
VPS50-218ENST00000485994 DBNLQ9UJU6 430 aaKnown RBP8.58□□□□□ -1.04
VPS50-218ENST00000485994 FZD1Q9UP38 647 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 CSADQ9Y600 493 aa8.58□□□□□ -1.04
VPS50-218ENST00000485994 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms